RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 KCNJ15Q99712 375 aa14.2□□□□□ -0.14
CPSF4-203ENST00000430038 DGCR6LQ9BY27 220 aa14.2□□□□□ -0.14
CPSF4-203ENST00000430038 MS4A7Q9GZW8 240 aaPredicted RBP14.2□□□□□ -0.14
CPSF4-203ENST00000430038 CENPMQ9NSP4 180 aa14.2□□□□□ -0.14
CPSF4-203ENST00000430038 TBC1D23Q9NUY8 699 aa14.2□□□□□ -0.14
CPSF4-203ENST00000430038 RNF7Q9UBF6 113 aa14.2□□□□□ -0.14
CPSF4-203ENST00000430038 MEGF8Q7Z7M0 2845 aa14.2□□□□□ -0.14
CPSF4-203ENST00000430038 DHRS12A0PJE2 317 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 SPRY1O43609 319 aaPredicted RBP14.19□□□□□ -0.14
CPSF4-203ENST00000430038 DCTN3O75935 186 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 SFTPBP07988 381 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 RNASE1P07998 156 aaKnown RBP14.19□□□□□ -0.14
CPSF4-203ENST00000430038 ENTPD1P49961 510 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 SLC25A1P53007 311 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 TRIM25Q14258 630 aaKnown RBP14.19□□□□□ -0.14
CPSF4-203ENST00000430038 DEFB112Q30KQ8 113 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 TEX30Q5JUR7 227 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 OR2T5Q6IEZ7 315 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 RPL13AP3Q6NVV1 102 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 DRAM2Q6UX65 266 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 C1orf87Q8N0U7 546 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 GCSAMQ8N6F7 178 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 OR2T29Q8NH02 315 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 ERGIC1Q969X5 290 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 SGK3Q96BR1 496 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 SEH1LQ96EE3 360 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 NSL1Q96IY1 281 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 COPS4Q9BT78 406 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 ADAT1Q9BUB4 502 aaKnown RBP14.19□□□□□ -0.14
CPSF4-203ENST00000430038 ZNF747Q9BV97 191 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 CLN8Q9UBY8 286 aa14.19□□□□□ -0.14
CPSF4-203ENST00000430038 A0A1B0GW55 424 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 GGT3PA6NGU5 568 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 TMPRSS2O15393 492 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 GMDSO60547 372 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 LHBP01229 141 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 GRPP07492 148 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 DUX4L2P0CJ85 424 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 DUX4L3P0CJ86 424 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 DUX4L4P0CJ87 422 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 DUX4L5P0CJ88 424 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 DUX4L6P0CJ89 424 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 DUX4L7P0CJ90 424 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 MMP9P14780 707 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 CPT2P23786 658 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 FMO3P31513 532 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 RUSC1-AS1Q66K80 236 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 DUX4L9Q6RFH8 374 aaPredicted RBP14.18□□□□□ -0.14
CPSF4-203ENST00000430038 BTNL3Q6UXE8 466 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 RBMS3Q6XE24 437 aaKnown RBP14.18□□□□□ -0.14
CPSF4-203ENST00000430038 LINC00471Q8N535 108 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 SPSB4Q96A44 273 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 PLEKHA8Q96JA3 519 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 CCT8L2Q96SF2 557 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 TBX15Q96SF7 602 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 MAGIXQ9H6Y5 334 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 C1orf123Q9NWV4 160 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 DUX4Q9UBX2 424 aa14.18□□□□□ -0.14
CPSF4-203ENST00000430038 IGHV3OR15-7A0A075B7D8 119 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 LGALS8O00214 317 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 PHYHO14832 338 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 WIPF1O43516 503 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 GYPAP02724 150 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 IRF2P14316 349 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 FAM3AP98173 230 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 DPY19L4Q7Z388 723 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 DHFR2Q86XF0 187 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 FAM90A1Q86YD7 464 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 OR6K6Q8NGW6 343 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 OR11L1Q8NGX0 322 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 FEVQ99581 238 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 ABHD6Q9BV23 337 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 PRDM13Q9H4Q3 707 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 FN3KRPQ9HA64 309 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 NDE1Q9NXR1 346 aa14.17□□□□□ -0.14
CPSF4-203ENST00000430038 MRPL15Q9P015 296 aaKnown RBP14.17□□□□□ -0.14
CPSF4-203ENST00000430038 SAMHD1Q9Y3Z3 626 aaKnown RBP14.17□□□□□ -0.14
CPSF4-203ENST00000430038 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.16□□□□□ -0.14
CPSF4-203ENST00000430038 CLDN34H7C241 214 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 ACOT8O14734 319 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 HOXA3O43365 443 aaPredicted RBP14.16□□□□□ -0.14
CPSF4-203ENST00000430038 OMGP23515 440 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 FOXL1Q12952 345 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 EIF2B1Q14232 305 aaKnown RBP14.16□□□□□ -0.14
CPSF4-203ENST00000430038 CD300LDQ6UXZ3 194 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 NLRC3Q7RTR2 1065 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 SLC16A9Q7RTY1 509 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 TIGD4Q8IY51 512 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 OR2T33Q8NG76 320 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 SGMS2Q8NHU3 365 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 SLC22A4Q9H015 551 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 MARCH7Q9H992 704 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 UNKLQ9H9P5 680 aaKnown RBP14.16□□□□□ -0.14
CPSF4-203ENST00000430038 CMC2Q9NRP2 79 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 TAS2R1Q9NYW7 299 aa14.16□□□□□ -0.14
CPSF4-203ENST00000430038 CENPVL3A0A0U1RRI6 287 aa14.15□□□□□ -0.14
CPSF4-203ENST00000430038 ZNF878C9JN71 531 aa14.15□□□□□ -0.14
CPSF4-203ENST00000430038 ADAM20O43506 726 aa14.15□□□□□ -0.14
CPSF4-203ENST00000430038 AMY2BP19961 511 aa14.15□□□□□ -0.14
CPSF4-203ENST00000430038 MDKP21741 143 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms