RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 ACTR3BQ9P1U1 418 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 CTSZQ9UBR2 303 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 U3KQV3 271 aa14.22□□□□□ -0.13
TRIM39-209ENST00000428728 hCG_1807616A0A1W2PRN6 198 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 LGALS8O00214 317 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 GRPP07492 148 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 SPI1P17947 270 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 PSMB10P40306 273 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 MAGEA2P43356 314 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 SPATS1Q496A3 300 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 GPR157Q5UAW9 335 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 SHISA2Q6UWI4 295 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 C9orf139Q6ZV77 190 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 KCNJ15Q99712 375 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 PCGF1Q9BSM1 259 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 TRIM15Q9C019 465 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 C1orf123Q9NWV4 160 aa14.21□□□□□ -0.13
TRIM39-209ENST00000428728 SAMHD1Q9Y3Z3 626 aaKnown RBP14.21□□□□□ -0.13
TRIM39-209ENST00000428728 TCRBV5S2A0A599 114 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 ZNF878C9JN71 531 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 CLDN34H7C241 214 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 TBX1O43435 398 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 ADAM20O43506 726 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 GMDSO60547 372 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 SFTPBP07988 381 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 KCNJ8Q15842 424 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 DEFB112Q30KQ8 113 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 RUSC1-AS1Q66K80 236 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 ZNF826PQ6ZT77 177 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 OR2T33Q8NG76 320 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 ZDHHC16Q969W1 377 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 REEP1Q9H902 201 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 SMURF1Q9HCE7 757 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 TNFRSF19Q9NS68 423 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 MRPL15Q9P015 296 aaKnown RBP14.2□□□□□ -0.14
TRIM39-209ENST00000428728 ERVK-18Q9QC07 812 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 BAIAP2Q9UQB8 552 aa14.2□□□□□ -0.14
TRIM39-209ENST00000428728 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.19□□□□□ -0.14
TRIM39-209ENST00000428728 OOEPA6NGQ2 149 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 ZNF593O00488 134 aaPredicted RBP14.19□□□□□ -0.14
TRIM39-209ENST00000428728 HOXA3O43365 443 aaPredicted RBP14.19□□□□□ -0.14
TRIM39-209ENST00000428728 XRCC2O43543 280 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 PTBP3O95758 552 aaKnown RBP14.19□□□□□ -0.14
TRIM39-209ENST00000428728 IFNGP01579 166 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 GYPAP02724 150 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 ANXA2P07355 339 aaKnown RBP14.19□□□□□ -0.14
TRIM39-209ENST00000428728 NPY4RP50391 375 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 IL13RA1P78552 427 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 EIF2B1Q14232 305 aaKnown RBP14.19□□□□□ -0.14
TRIM39-209ENST00000428728 PIGWQ7Z7B1 504 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 OR6N2Q8NGY6 317 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 NMNAT2Q9BZQ4 307 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 OPA3Q9H6K4 179 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 MAGIXQ9H6Y5 334 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 MED20Q9H944 212 aa14.19□□□□□ -0.14
TRIM39-209ENST00000428728 IGHV3OR15-7A0A075B7D8 119 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 TRAV38-1A0A0B4J264 116 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 DHRS12A0PJE2 317 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 RIIAD1A6NNX1 92 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 B2RBV5 119 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 WIPF1O43516 503 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 ZNF3P17036 446 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 OMGP23515 440 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 HSD11B1P28845 292 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 CFHR2P36980 270 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 CX3CR1P49238 355 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 SLC25A1P53007 311 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 GRB2P62993 217 aaKnown RBP14.18□□□□□ -0.14
TRIM39-209ENST00000428728 PCK2Q16822 640 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 TIGD6Q17RP2 521 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 MICAQ29983 383 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 GFOD2Q3B7J2 385 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 OR2T5Q6IEZ7 315 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 LCN8Q6JVE9 175 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 DHFR2Q86XF0 187 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 ERI1Q8IV48 349 aaKnown RBP14.18□□□□□ -0.14
TRIM39-209ENST00000428728 IQCF1Q8N6M8 205 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 PLPP7Q8NBV4 271 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 OR2T29Q8NH02 315 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 OR8S1Q8NH09 359 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 OTULINQ96BN8 352 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 DGCR6LQ9BY27 220 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 RASSF4Q9H2L5 321 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 MARCH7Q9H992 704 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 TRIM36Q9NQ86 728 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 DNAJC27Q9NZQ0 273 aa14.18□□□□□ -0.14
TRIM39-209ENST00000428728 FAM183AA6NL82 134 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 ANKRD30BLA7E2S9 258 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 TOX4O94842 621 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 MDKP21741 143 aaPredicted RBP14.17□□□□□ -0.14
TRIM39-209ENST00000428728 MNAT1P51948 309 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 POU4F2Q12837 409 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 FAM98BQ52LJ0 330 aaKnown RBP14.17□□□□□ -0.14
TRIM39-209ENST00000428728 TEX30Q5JUR7 227 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 PRR31Q5SQ13 230 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 CD276Q5ZPR3 534 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 SLC16A9Q7RTY1 509 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 DPY19L4Q7Z388 723 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 FAM90A1Q86YD7 464 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 GCSAMQ8N6F7 178 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms