RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 HMGN1P05114 100 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 PAICSP22234 425 aaKnown RBP16.06■□□□□ 0.16
COL9A2-204ENST00000427563 EPHA2P29317 976 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 CRISP1P54107 249 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 GRB2P62993 217 aaKnown RBP16.06■□□□□ 0.16
COL9A2-204ENST00000427563 TAF13Q15543 124 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 PARP8Q8N3A8 854 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 SPICQ8N5J4 248 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 OR56B2PQ8NGI1 322 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 OTOSQ8NHW6 89 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 TMEM158Q8WZ71 300 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 SGK3Q96BR1 496 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 CENPNQ96H22 339 aaPredicted RBP16.06■□□□□ 0.16
COL9A2-204ENST00000427563 SEMA6AQ9H2E6 1030 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 PPP1R3EQ9H7J1 279 aa16.06■□□□□ 0.16
COL9A2-204ENST00000427563 PAPOLBQ9NRJ5 636 aaKnown RBP16.06■□□□□ 0.16
COL9A2-204ENST00000427563 POLR3KQ9Y2Y1 108 aaPredicted RBP16.06■□□□□ 0.16
COL9A2-204ENST00000427563 STAB1Q9NY15 2570 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 GGT3PA6NGU5 568 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 A8MXK9 166 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 PRR32B1ATL7 298 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 M0R129 80 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 PRODHO43272 600 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 FAM20BO75063 409 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 FSHBP01225 129 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 WNT2P09544 360 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 ADRA2CP18825 462 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 MDH2P40926 338 aaKnown RBP16.05■□□□□ 0.16
COL9A2-204ENST00000427563 NAA10P41227 235 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-204ENST00000427563 HCCSP53701 268 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 ZNF121P58317 390 aaPredicted RBP16.05■□□□□ 0.16
COL9A2-204ENST00000427563 FAM3AP98173 230 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 OR8G1Q15617 311 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 DCAF12L2Q5VW00 463 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 SHFQ7M4L6 423 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 PQLC1Q8N2U9 271 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 CELF2-AS1Q8N7Q2 184 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 C19orf18Q8NEA5 215 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 Q8TCH9 128 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 TMEM246Q9BRR3 403 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 ADAT1Q9BUB4 502 aaKnown RBP16.05■□□□□ 0.16
COL9A2-204ENST00000427563 TOR3AQ9H497 397 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 UFSP2Q9NUQ7 469 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 TVP23BQ9NYZ1 205 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 DNAJC27Q9NZQ0 273 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 ANK2Q01484 3957 aa16.05■□□□□ 0.16
COL9A2-204ENST00000427563 A0A0G2JMP0 313 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 A0A0X1KG70 313 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 hCG_38984A0A1B0GV85 526 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 IFNL4K9M1U5 179 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 PRKYO43930 277 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 EFNB1P98172 346 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 PAX2Q02962 417 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 PTGES3Q15185 160 aaKnown RBP16.04■□□□□ 0.16
COL9A2-204ENST00000427563 SLC35D3Q5M8T2 416 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 FAM57BQ71RH2 274 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 SLC16A9Q7RTY1 509 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 BCDIN3DQ7Z5W3 292 aaKnown RBP16.04■□□□□ 0.16
COL9A2-204ENST00000427563 KLHL36Q8N4N3 616 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 RFLNBQ8N5W9 214 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 DEFB108BQ8NET1 73 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 OR4M2Q8NGB6 313 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 MRPL15Q9P015 296 aaKnown RBP16.04■□□□□ 0.16
COL9A2-204ENST00000427563 PCDHB10Q9UN67 800 aa16.04■□□□□ 0.16
COL9A2-204ENST00000427563 TBX1O43435 398 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 XRCC2O43543 280 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 FOXH1O75593 365 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 ANXA2P07355 339 aaKnown RBP16.03■□□□□ 0.16
COL9A2-204ENST00000427563 LYNP07948 512 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 HSD11B1P28845 292 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 SLC15A1P46059 708 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 APOFQ13790 326 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 RCN1Q15293 331 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 ZNF404Q494X3 552 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 KDM4DQ6B0I6 523 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 LYPD2Q6UXB3 125 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 RHOUQ7L0Q8 258 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 C1QL2Q7Z5L3 287 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 WDR86Q86TI4 376 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 THEM6Q8WUY1 208 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 DNAJC9Q8WXX5 260 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 REEP6Q96HR9 211 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 GABARAPL1Q9H0R8 117 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 KIF17Q9P2E2 1029 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 METRNQ9UJH8 293 aa16.03■□□□□ 0.16
COL9A2-204ENST00000427563 PPIAL4EA0A075B759 164 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 PPIAL4CA0A0B4J2A2 164 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 PPIAL4DF5H284 164 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 J3QLI3 93 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 GMDSO60547 372 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 VENTXO95231 258 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 FSTL3O95633 263 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 BAG2O95816 211 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 PPIAL4FP0DN26 164 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 ZNF12P17014 697 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 ALOX5APP20292 161 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 SNAPC1Q16533 368 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 LRRN1Q6UXK5 716 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 KLBQ86Z14 1044 aa16.02■□□□□ 0.16
COL9A2-204ENST00000427563 MUC20Q8N307 709 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms