RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CALHM3Q86XJ0 350 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 KIR3DL3Q8N743 410 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 NKAIN3Q8N8D7 197 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 C10orf82Q8WW14 230 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 TFAP2CQ92754 450 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 RFKQ969G6 155 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 RNF170Q96K19 258 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 SAMD8Q96LT4 415 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 WWC2-AS2Q96NR7 200 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 MOGAT1Q96PD6 335 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 ANKRD60Q9BZ19 345 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 CSNK1G1Q9HCP0 422 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 C12orf4Q9NQ89 552 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 GOLT1BQ9Y3E0 138 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 POLR3HQ9Y535 204 aaPredicted RBP3.13□□□□□ -1.91
TOP2A-201ENST00000423485 TSSC4Q9Y5U2 329 aaPredicted RBP3.13□□□□□ -1.91
TOP2A-201ENST00000423485 OTOGLQ3ZCN5 2332 aa3.13□□□□□ -1.91
TOP2A-201ENST00000423485 OR6C6A6NF89 314 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 BBIP1A8MTZ0 92 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 M0QYG6 137 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CHP2O43745 196 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MITFO75030 526 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CRPP02741 224 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CHRM2P08172 466 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 GLI4P10075 376 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 AKR1C4P17516 323 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 COILP38432 576 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MRPL28Q13084 256 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 EXOSC7Q15024 291 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 IGFL3Q6UXB1 125 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 DCDC5Q6ZRR9 648 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MARCH3Q86UD3 253 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CADM3Q8N126 398 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ABHD12Q8N2K0 398 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PARP8Q8N3A8 854 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 OR2T4Q8NH00 348 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 OR5W2Q8NH69 310 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MFSD8Q8NHS3 518 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 NTNG2Q96CW9 530 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SCARF2Q96GP6 870 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 KCTD14Q9BQ13 255 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ADAT1Q9BUB4 502 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 EXOSC4Q9NPD3 245 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ACOXLQ9NUZ1 547 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 C1orf123Q9NWV4 160 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 IL19Q9UHD0 177 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 KCNK7Q9Y2U2 307 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 NDUFAF1Q9Y375 327 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TSC22D4Q9Y3Q8 395 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 KNTC1P50748 2209 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 RPS10-NUDT3A0A1W2PQS6 291 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 A8MXE2 369 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CLIC1O00299 241 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF821O75541 412 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 NPPAP01160 153 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TSPAN19P0C672 248 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 GIPRP48546 466 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 AQP5P55064 265 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 HILS1P60008 231 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ACTA2P62736 377 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ACTC1P68032 377 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ACTA1P68133 377 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 FAM27E3Q08E93 113 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 KLF10Q13118 480 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TNK1Q13470 666 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TBRG1Q3YBR2 411 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 OTUD1Q5VV17 481 aaPredicted RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 KIRREL2Q6UWL6 708 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF534Q76KX8 674 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TCF23Q7RTU1 214 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 Q8N402 240 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 OR52L2PQ8NGH6 319 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 OR6N2Q8NGY6 317 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF519Q8TB69 540 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 OIT3Q8WWZ8 545 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 RSPRY1Q96DX4 576 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ELP4Q96EB1 424 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MNTQ99583 582 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 WDR13Q9H1Z4 485 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 NOX3Q9HBY0 568 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 S100A14Q9HCY8 104 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PARP11Q9NR21 331 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ZFP57Q9NU63 452 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CLEC4EQ9ULY5 219 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 AKAP6Q13023 2319 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 FAM230AA0A1W2PPH8 454 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TMEM82A0PJX8 343 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 PQLC2LA1A4F0 135 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 METTL21EPA6NDL7 271 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 TEX46H3BTG2 121 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 K7EQM0 130 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SULT1C2O00338 296 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 DEGS1O15121 323 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 GPR37O15354 613 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 NIPSNAP2O75323 286 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 UBCP0CG48 685 aaKnown RBP3.12□□□□□ -1.91
TOP2A-201ENST00000423485 MYOD1P15172 320 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 CXCR4P61073 352 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 ISL1P61371 349 aa3.12□□□□□ -1.91
TOP2A-201ENST00000423485 SNRPNP63162 240 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms