RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 SMARCD3Q6STE5 483 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 CYP2R1Q6VVX0 501 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 PTCHD4Q6ZW05 846 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 LINC00346Q8IVM7 164 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 OR52J3Q8NH60 311 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 LRTOMTQ8WZ04 291 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 SPTSSAQ969W0 71 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 DACT3Q96B18 629 aaPredicted RBP12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 TSSK2Q96PF2 358 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 CITED1Q99966 193 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 DPAGT1Q9H3H5 408 aa12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 CAB39Q9Y376 341 aaPredicted RBP12.94□□□□□ -0.34
SBDSP1-201ENST00000415772 CENPVL3A0A0U1RRI6 287 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 AQP12BA6NM10 295 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 C22orf46C9J442 243 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 LGALS8O00214 317 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 IMPA2O14732 288 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 OR10H3O60404 316 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 GPR137BO60478 399 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 PPP1R3DO95685 299 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 ACSM4P0C7M7 580 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 ZNF26P17031 533 aaPredicted RBP12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 SLC6A6P31641 620 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 PSMB10P40306 273 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 CDKN2AP42771 156 aaKnown RBP12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 RASSF2P50749 326 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 HIST1H3AP68431 136 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 MS4A2Q01362 244 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 MZT1Q08AG7 82 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 COX10Q12887 443 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 MAB21L1Q13394 359 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 HIST2H3PS2Q5TEC6 136 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 RPL13AP3Q6NVV1 102 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 ZNF841Q6ZN19 808 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 HIST2H3AQ71DI3 136 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 AQP12AQ8IXF9 295 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 FANK1Q8TC84 345 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 THTPAQ9BU02 230 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 B9D1Q9UPM9 204 aa12.93□□□□□ -0.34
SBDSP1-201ENST00000415772 IGHV1-69DA0A0B4J2H0 117 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 ACOT8O14734 319 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 ARPC3O15145 178 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 IDH3BO43837 385 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 GMDSO60547 372 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 ATP5HO75947 161 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 TXNDC12O95881 172 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 IGHV1-69P01742 117 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 GRPP07492 148 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 RAP2AP10114 183 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 ZNF823P16415 610 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 ARF6P62330 175 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 MPPED2Q15777 294 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 RFX4Q33E94 735 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 CLEC12AQ5QGZ9 265 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 GDPGP1Q6ZNW5 385 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 CFAP77Q6ZQR2 320 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 LNX2Q8N448 690 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 GNPDA2Q8TDQ7 276 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 ST8SIA4Q92187 359 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 NMNAT3Q96T66 252 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 RBM4BQ9BQ04 359 aaKnown RBP12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 BTBD10Q9BSF8 475 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 IFT27Q9BW83 186 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 RPRD1BQ9NQG5 326 aaKnown RBP12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 C14orf119Q9NWQ9 140 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 C1orf123Q9NWV4 160 aa12.92□□□□□ -0.34
SBDSP1-201ENST00000415772 OOEPA6NGQ2 149 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 M0R135 149 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 TNFRSF11BO00300 401 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 ECDO95905 644 aaPredicted RBP12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 GSSP48637 474 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 RELBQ01201 579 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 TSPAN31Q12999 210 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 SLC18B1Q6NT16 456 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 COLCA1Q6ZS62 124 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 PDZD9Q8IXQ8 264 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 SPERTQ8NA61 448 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 SLC26A10Q8NG04 563 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 OR4K13Q8NH42 304 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 ZNF799Q96GE5 643 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 TBX15Q96SF7 602 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 RASSF4Q9H2L5 321 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 CTSZQ9UBR2 303 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 LYVE1Q9Y5Y7 322 aa12.91□□□□□ -0.34
SBDSP1-201ENST00000415772 IGLV1-36A0A0B4J1U3 117 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 SLC22A31A6NKX4 558 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 CD300LBA8K4G0 201 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 DCTN6O00399 190 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 DNAJC8O75937 253 aaPredicted RBP12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 IGHV4-59P01825 116 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 GYPAP02724 150 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 GRK5P34947 590 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 BNIP1Q12981 228 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 TAF13Q15543 124 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 DHRS7BQ6IAN0 325 aaPredicted RBP12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 OR2T5Q6IEZ7 315 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 BTN2A1Q7KYR7 527 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 NAA40Q86UY6 237 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 CMTM4Q8IZR5 234 aa12.9□□□□□ -0.34
SBDSP1-201ENST00000415772 OR6V1Q8N148 313 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms