RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 ZNF85Q03923 595 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 ZNF91Q05481 1191 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 SLC34A1Q06495 639 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 MFGE8Q08431 387 aaPredicted RBP11.15□□□□□ -0.62
HDAC8-210ENST00000412342 CARTPTQ16568 116 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.15□□□□□ -0.62
HDAC8-210ENST00000412342 OR2Z1Q8NG97 314 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 OR10AD1Q8NGE0 317 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 OR56B2PQ8NGI1 322 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 OR2T27Q8NH04 317 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 RNFT2Q96EX2 444 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 REEP6Q96HR9 211 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 LYZL4Q96KX0 146 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 TBX5Q99593 518 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 APOL4Q9BPW4 351 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 SOX7Q9BT81 388 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 OR10A2Q9H208 303 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 SP140LQ9H930 580 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 RNPEPL1Q9HAU8 725 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 BRD7Q9NPI1 651 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 DECR2Q9NUI1 292 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 IL19Q9UHD0 177 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 EXOGQ9Y2C4 368 aaKnown RBP11.15□□□□□ -0.62
HDAC8-210ENST00000412342 N6AMT1Q9Y5N5 214 aa11.15□□□□□ -0.62
HDAC8-210ENST00000412342 TLN2Q9Y4G6 2542 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 NSD1Q96L73 2696 aaPredicted RBP11.14□□□□□ -0.63
HDAC8-210ENST00000412342 CSPG4Q6UVK1 2322 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 ACOD1A6NK06 481 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 LY6G6DO95868 133 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 HLA-DPB1P04440 258 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 DBTP11182 482 aaKnown RBP11.14□□□□□ -0.63
HDAC8-210ENST00000412342 USF1P22415 310 aaPredicted RBP11.14□□□□□ -0.63
HDAC8-210ENST00000412342 RBMXP38159 391 aaKnown RBP11.14□□□□□ -0.63
HDAC8-210ENST00000412342 MMP16P51512 607 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 RIDAP52758 137 aaKnown RBP11.14□□□□□ -0.63
HDAC8-210ENST00000412342 OR8B8Q15620 311 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 TIGD6Q17RP2 521 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 PLEKHG7Q6ZR37 379 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 ZNF540Q8NDQ6 660 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 ZNF555Q8NEP9 628 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 ITLN1Q8WWA0 313 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 RNF166Q96A37 237 aaPredicted RBP11.14□□□□□ -0.63
HDAC8-210ENST00000412342 LGALS12Q96DT0 336 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 PGAM5Q96HS1 289 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 MEGF10Q96KG7 1140 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 OR2V2Q96R30 315 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 ADI1Q9BV57 179 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 EGLN1Q9GZT9 426 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 RGCCQ9H4X1 137 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 TMEM100Q9NV29 134 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 DCAF16Q9NXF7 216 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 MRPL15Q9P015 296 aaKnown RBP11.14□□□□□ -0.63
HDAC8-210ENST00000412342 NUFIP1Q9UHK0 495 aaKnown RBP11.14□□□□□ -0.63
HDAC8-210ENST00000412342 IKZF2Q9UKS7 526 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 ABCA1O95477 2261 aa11.14□□□□□ -0.63
HDAC8-210ENST00000412342 A0A0U1RQV5 110 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 TMEM269A0A1B0GVZ9 245 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 GGT3PA6NGU5 568 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 F5H5P2 479 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 WNT9BO14905 357 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 PTBP3O95758 552 aaKnown RBP11.13□□□□□ -0.63
HDAC8-210ENST00000412342 HEXAP06865 529 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 ACKR3P25106 362 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 GSK3AP49840 483 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 TMEM33P57088 247 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 MAB21L1Q13394 359 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 SMN1Q16637 294 aaKnown RBP11.13□□□□□ -0.63
HDAC8-210ENST00000412342 TMEM249Q2WGJ8 235 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 TTC23Q5W5X9 447 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 KRT74Q7RTS7 529 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 OR10H4Q8NGA5 316 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 SPRYD4Q8WW59 207 aaPredicted RBP11.13□□□□□ -0.63
HDAC8-210ENST00000412342 PPP1R14AQ96A00 147 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 SIGLEC11Q96RL6 698 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 ZNF649Q9BS31 505 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 PBOV1Q9GZY1 135 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 MRPS18AQ9NVS2 196 aaKnown RBP11.13□□□□□ -0.63
HDAC8-210ENST00000412342 R4GMQ9 66 aa11.13□□□□□ -0.63
HDAC8-210ENST00000412342 LRP5LA4QPB2 252 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 TPD52L2O43399 206 aaKnown RBP11.12□□□□□ -0.63
HDAC8-210ENST00000412342 SULT1C4O75897 302 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 IGHA1P01876 353 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 TTRP02766 147 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 GNAO1P09471 354 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 CA6P23280 308 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 TNFSF4P23510 183 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 CFL1P23528 166 aaKnown RBP11.12□□□□□ -0.63
HDAC8-210ENST00000412342 IL2RGP31785 369 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 DDOSTP39656 456 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 CD200P41217 278 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 GATA4P43694 442 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 GPR6P46095 362 aaPredicted RBP11.12□□□□□ -0.63
HDAC8-210ENST00000412342 ACTC1P68032 377 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 ACTA1P68133 377 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 HFEQ30201 348 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 GFOD2Q3B7J2 385 aa11.12□□□□□ -0.63
HDAC8-210ENST00000412342 ZNF829Q3KNS6 432 aaPredicted RBP11.12□□□□□ -0.63
HDAC8-210ENST00000412342 CDONQ4KMG0 1287 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms