RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ZBTB46Q86UZ6 589 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GCSAMQ8N6F7 178 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SPERTQ8NA61 448 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 OR52J3Q8NH60 311 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 RP9Q8TA86 221 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FANK1Q8TC84 345 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SPTSSAQ969W0 71 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 MAP6Q96JE9 813 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 IFT27Q9BW83 186 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 NSRP1Q9H0G5 558 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SEMA6AQ9H2E6 1030 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 OR52D1Q9H346 318 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FN3KQ9H479 309 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FGFR1OP2Q9NVK5 253 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 RPUSD1Q9UJJ7 312 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 KPTNQ9Y664 436 aa11.74□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ZNF816-ZNF321PA0A0X1KG74 233 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 A0A1B0GVI7 797 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 C5orf63A6NC05 138 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 OR6C68A6NDL8 312 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 BTBD17A6NE02 478 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ARPC3O15145 178 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 LHBP01229 141 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CSF1P09603 554 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ZNF823P16415 610 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ANOS1P23352 680 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 NOS3P29474 1203 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 C2orf68Q2NKX9 166 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 GLYATL3Q5SZD4 288 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TET2Q6N021 2002 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CGB2Q6NT52 195 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FGFRL1Q8N441 504 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 LNX2Q8N448 690 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 HOPXQ9BPY8 73 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 C14orf119Q9NWQ9 140 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 MRPL22Q9NWU5 206 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 MRPL15Q9P015 296 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ONECUT1Q9UBC0 465 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CAB39Q9Y376 341 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB2-229ENST00000411527 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 BHLHE40O14503 412 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SLC22A2O15244 555 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TSPAN9O75954 239 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FBP1P09467 338 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 COX4I1P13073 169 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 RPS27P42677 84 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 MZT1Q08AG7 82 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 KRT72Q14CN4 511 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FBLN7Q53RD9 439 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TEX36Q5VZQ5 186 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SDR9C7Q8NEX9 313 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 C7orf34Q96L11 122 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 CCL13Q99616 98 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 KCTD14Q9BQ13 255 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 FUZQ9BT04 418 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ADA2Q9NZK5 511 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ZNRD1Q9P1U0 126 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DNAJB11Q9UBS4 358 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 KCNG2Q9UJ96 466 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 VPREB3Q9UKI3 123 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 N6AMT1Q9Y5N5 214 aa11.72□□□□□ -0.53
HLA-DQB2-229ENST00000411527 A0A1B0GW55 424 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 A0A1W2PRD5 423 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 A0A1W2PRF3 423 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 A0A1W2PRM7 423 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DUX4L2P0CJ85 424 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DUX4L3P0CJ86 424 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DUX4L4P0CJ87 422 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DUX4L5P0CJ88 424 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DUX4L6P0CJ89 424 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DUX4L7P0CJ90 424 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 TGFBR2P37173 567 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ELF3P78545 371 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 PRB3Q04118 309 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 EGR3Q06889 387 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 MICBQ29980 383 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SLC35F1Q5T1Q4 408 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DUX4L9Q6RFH8 374 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DRAM2Q6UX65 266 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 HDXQ7Z353 690 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 LY6G5BQ8NDX9 201 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 OR56B2PQ8NGI1 322 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 NPRL2Q8WTW4 380 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 LRRC29Q8WV35 223 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DHRS1Q96LJ7 313 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 SIRT7Q9NRC8 400 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 DUX4Q9UBX2 424 aa11.71□□□□□ -0.53
HLA-DQB2-229ENST00000411527 ANKRD61A6NGH8 418 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 TVP23AA6NH52 213 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 IDH3BO43837 385 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GADD45GO95257 159 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 MUC1P15941 1255 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 EEF1B2P24534 225 aaKnown RBP11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 OTX1P32242 354 aaPredicted RBP11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PYCR1P32322 319 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GRK5P34947 590 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 PRKXP51817 358 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 GUCA2AQ02747 115 aa11.7□□□□□ -0.54
HLA-DQB2-229ENST00000411527 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms