RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 A0A0G2JMP0 313 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 A0A0X1KG70 313 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 PRR32B1ATL7 298 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 PRODHO43272 600 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 TBX1O43435 398 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 PRKYO43930 277 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 ANXA2P07355 339 aaKnown RBP15.96■□□□□ 0.15
SF3A1-202ENST00000411423 WNT2P09544 360 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 MDH2P40926 338 aaKnown RBP15.96■□□□□ 0.15
SF3A1-202ENST00000411423 APOFQ13790 326 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 C1orf146Q5VVC0 180 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 SHFQ7M4L6 423 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 SLC16A9Q7RTY1 509 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 PARP8Q8N3A8 854 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 KLHL36Q8N4N3 616 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 CELF2-AS1Q8N7Q2 184 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 OR4M2Q8NGB6 313 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 Q8TCH9 128 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 TOR3AQ9H497 397 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 BRD7Q9NPI1 651 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 KIF17Q9P2E2 1029 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 PCDHB10Q9UN67 800 aa15.96■□□□□ 0.15
SF3A1-202ENST00000411423 hCG_38984A0A1B0GV85 526 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 A8MXK9 166 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 XRCC2O43543 280 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 ATP5HO75947 161 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 PTBP3O95758 552 aaKnown RBP15.95■□□□□ 0.14
SF3A1-202ENST00000411423 FSHBP01225 129 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 LYNP07948 512 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 HSD11B1P28845 292 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 SNAPC1Q16533 368 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 ZNF404Q494X3 552 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 SLC35D3Q5M8T2 416 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 LYPD2Q6UXB3 125 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 LRRN1Q6UXK5 716 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 ASRGL1Q7L266 308 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 C1QL2Q7Z5L3 287 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 WDR86Q86TI4 376 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 RFLNBQ8N5W9 214 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 DEFB108BQ8NET1 73 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 THEM6Q8WUY1 208 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 REEP6Q96HR9 211 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 MRPL15Q9P015 296 aaKnown RBP15.95■□□□□ 0.14
SF3A1-202ENST00000411423 METRNQ9UJH8 293 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 POLR3KQ9Y2Y1 108 aaPredicted RBP15.95■□□□□ 0.14
SF3A1-202ENST00000411423 AP4S1Q9Y587 144 aa15.95■□□□□ 0.14
SF3A1-202ENST00000411423 IFNL4K9M1U5 179 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 FOXH1O75593 365 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 RGS9O75916 674 aaPredicted RBP15.94■□□□□ 0.14
SF3A1-202ENST00000411423 VENTXO95231 258 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 MRPL3P09001 348 aaKnown RBP15.94■□□□□ 0.14
SF3A1-202ENST00000411423 H2BFMP0C1H6 154 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 ALOX5APP20292 161 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 SLC15A1P46059 708 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 RASSF2P50749 326 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 EFNB1P98172 346 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 PAX2Q02962 417 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 KDM4DQ6B0I6 523 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 ZNF826PQ6ZT77 177 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 DNAJC9Q8WXX5 260 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 PLEKHA8Q96JA3 519 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 LYZL4Q96KX0 146 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 TEAD3Q99594 435 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 C19orf24Q9BVV8 132 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 GABARAPL1Q9H0R8 117 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 MMADHCQ9H3L0 296 aaPredicted RBP15.94■□□□□ 0.14
SF3A1-202ENST00000411423 C7orf69Q9H7B7 122 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 COPS3Q9UNS2 423 aa15.94■□□□□ 0.14
SF3A1-202ENST00000411423 PPIAL4EA0A075B759 164 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 ZAR1LA6NP61 321 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 PPIAL4DF5H284 164 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 G3V2T6 193 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 J3QLI3 93 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 PSMD9O00233 223 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 TCF21O43680 179 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 GMDSO60547 372 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 PPIAL4FP0DN26 164 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 ZNF12P17014 697 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 POLR2IP36954 125 aaKnown RBP15.93■□□□□ 0.14
SF3A1-202ENST00000411423 RPS7P62081 194 aaKnown RBP15.93■□□□□ 0.14
SF3A1-202ENST00000411423 TIGD6Q17RP2 521 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 GFOD2Q3B7J2 385 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 C12orf73Q69YU5 71 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 RHOUQ7L0Q8 258 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 KLBQ86Z14 1044 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 MUC20Q8N307 709 aaPredicted RBP15.93■□□□□ 0.14
SF3A1-202ENST00000411423 SEMA6DQ8NFY4 1073 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 SEMA6AQ9H2E6 1030 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 KRT84Q9NSB2 600 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 PPIAL4AQ9Y536 164 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 LRP12Q9Y561 859 aa15.93■□□□□ 0.14
SF3A1-202ENST00000411423 ANK2Q01484 3957 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 PPIAL4CA0A0B4J2A2 164 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 C3orf80F5H4A9 247 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 EPHA1P21709 976 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 ACKR3P25106 362 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 FASP25445 335 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 CD80P33681 288 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 GSK3AP49840 483 aa15.92■□□□□ 0.14
SF3A1-202ENST00000411423 ESRRGP62508 458 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 269.6 ms