RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 IL5P05113 134 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 SLC6A9P48067 706 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 TAS2R19P59542 299 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 AWAT2Q6E213 333 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 SLC7A5P1Q8MH63 180 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 TMEM229BQ8NBD8 167 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 OR51S1Q8NGJ8 323 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 OR8S1Q8NH09 359 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 SSC4DQ8WTU2 575 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 FAM46BQ96A09 425 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 GINS4Q9BRT9 223 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 HES7Q9BYE0 225 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 RANBP3Q9H6Z4 567 aaPredicted RBP17.67■□□□□ 0.42
USP39-204ENST00000409766 ABI3Q9P2A4 366 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 NPTNQ9Y639 398 aa17.67■□□□□ 0.42
USP39-204ENST00000409766 MED13Q9UHV7 2174 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 TMEM235A6NFC5 223 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 CYTIPO60759 359 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 AIMP2Q13155 320 aaKnown RBP17.66■□□□□ 0.42
USP39-204ENST00000409766 OR1C1Q15619 314 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 CSRP2Q16527 193 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 NDUFA5Q16718 116 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 HYAL4Q2M3T9 481 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 ZNF260Q3ZCT1 412 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 SUMF1Q8NBK3 374 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 CPT1CQ8TCG5 803 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 ZNF845Q96IR2 970 aaPredicted RBP17.66■□□□□ 0.42
USP39-204ENST00000409766 GON7Q9BXV9 100 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 TMEM38BQ9NVV0 291 aa17.66■□□□□ 0.42
USP39-204ENST00000409766 IGKV1-9A0A0C4DH69 117 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 M0R135 149 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 HPNP05981 417 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 DBHP09172 617 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 RFC3P40938 356 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 TMEM53Q6P2H8 277 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 Q6ZSR3 168 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 SULF2Q8IWU5 870 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 ZNF799Q96GE5 643 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 C1orf147Q96MC9 270 aaPredicted RBP17.65■□□□□ 0.42
USP39-204ENST00000409766 ZNF107Q9UII5 783 aaPredicted RBP17.65■□□□□ 0.42
USP39-204ENST00000409766 V9GYS6 101 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 AKR7A2O43488 359 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 APOC1P02654 83 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 CST2P09228 141 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 CPN1P15169 458 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 TRIP6Q15654 476 aaKnown RBP17.65■□□□□ 0.42
USP39-204ENST00000409766 ZNF626Q68DY1 528 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 SLC36A1Q7Z2H8 476 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 DTX1Q86Y01 620 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 C9orf62Q8N4C0 152 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 SPTSSAQ969W0 71 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 CMBLQ96DG6 245 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 IP6K3Q96PC2 410 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 ALKBH3Q96Q83 286 aaPredicted RBP17.65■□□□□ 0.42
USP39-204ENST00000409766 ZNF436Q9C0F3 470 aaPredicted RBP17.65■□□□□ 0.42
USP39-204ENST00000409766 DLL4Q9NR61 685 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 PLA2G3Q9NZ20 509 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 KLK13Q9UKR3 277 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 MRPS28Q9Y2Q9 187 aaKnown RBP17.65■□□□□ 0.42
USP39-204ENST00000409766 CACNA1HO95180 2353 aa17.65■□□□□ 0.42
USP39-204ENST00000409766 SNRPGP15A8MWD9 76 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 DHRS3O75911 302 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 MELTFP08582 738 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 CELA3AP09093 270 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 CRYGSP22914 178 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 RIPPLY2Q5TAB7 128 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 GLIPR1L1Q6UWM5 242 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 LINC00696Q6ZRV3 163 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 ABHD3Q8WU67 409 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 NUDT16L1Q9BRJ7 211 aaKnown RBP17.64■□□□□ 0.41
USP39-204ENST00000409766 GPN1Q9HCN4 374 aaPredicted RBP17.64■□□□□ 0.41
USP39-204ENST00000409766 PTTG3PQ9NZH4 202 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 B4GALT7Q9UBV7 327 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 HSPB11Q9Y547 144 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 ZNF318Q5VUA4 2279 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 SGCEO43556 437 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 CREBL2O60519 120 aaPredicted RBP17.64■□□□□ 0.41
USP39-204ENST00000409766 SCGNO76038 276 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 RAB3DO95716 219 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 CYB5AP00167 134 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 HCKP08631 526 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 VSIG10L2P0DP72 767 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 OR3A4PP47883 348 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 GSK3AP49840 483 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 LHX2P50458 406 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 ECH1Q13011 328 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 RAB35Q15286 201 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 PDSS1Q5T2R2 415 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 OR2W3Q7Z3T1 314 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 ZNF101Q8IZC7 436 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 OR11H4Q8NGC9 324 aa17.64■□□□□ 0.41
USP39-204ENST00000409766 SYNGR3O43761 229 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 CD74P04233 296 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 NUBP1P53384 320 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 SNRPD2P62316 118 aaKnown RBP17.63■□□□□ 0.41
USP39-204ENST00000409766 CDNFQ49AH0 187 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 GALNT16Q8N428 558 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 SPICQ8N5J4 248 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 TTTY12Q9BZ98 90 aa17.63■□□□□ 0.41
USP39-204ENST00000409766 ZNF69Q9UC07 566 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms