RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 THRSPQ92748 146 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 PSMG2Q969U7 264 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 MIB2Q96AX9 1013 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 GALNT14Q96FL9 552 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 RITA1Q96K30 269 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 CD180Q99467 661 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 PBDC1Q9BVG4 233 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 SLC17A9Q9BYT1 436 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 SLCO5A1Q9H2Y9 848 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 TRPV4Q9HBA0 871 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 CRLF2Q9HC73 371 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 MYNNQ9NPC7 610 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 MRPL15Q9P015 296 aaKnown RBP4.85□□□□□ -1.63
CLK1-202ENST00000409403 P2RX2Q9UBL9 471 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 MTFP1Q9UDX5 166 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 FOXJ3Q9UPW0 622 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 ADAM18Q9Y3Q7 739 aa4.85□□□□□ -1.63
CLK1-202ENST00000409403 IGLV3-10A0A075B6K4 115 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 SMIM28A0A1B0GU29 152 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ZNF726A6NNF4 738 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 A8MWP6 167 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 HHLA1C9JL84 531 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ZNF197O14709 1029 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 INSIG1O15503 277 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ZNF208O43345 1280 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 HCRTO43612 131 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 CTNSO60931 367 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 MOSPD3O75425 235 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 DFFBO76075 338 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 SLC25A14O95258 325 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 NSA2O95478 260 aaKnown RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 PLGP00747 810 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 CTSLP07711 333 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 OR4E1P0C645 316 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 PRSS56P0CW18 603 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 SLC6A12P48065 614 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 PTH2RP49190 550 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 TAS2R20P59543 309 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 LSM6P62312 80 aaKnown RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 ZXDBP98169 803 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 OC90Q02509 493 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 CHIT1Q13231 466 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 FHL2Q14192 279 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 GAMTQ14353 236 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 INSL4Q14641 139 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 SURF2Q15527 256 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 SYPL1Q16563 259 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ACTBL2Q562R1 376 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 DCAF10Q5QP82 559 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 C9orf64Q5T6V5 341 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 MED27Q6P2C8 311 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 FAHD2BQ6P2I3 314 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 NIPAL3Q6P499 406 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 FAM199XQ6PEV8 388 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 ZNF474Q6S9Z5 364 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 RTL10Q7L3V2 364 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 MDGA2Q7Z553 956 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 TECPR1Q7Z6L1 1165 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 LRRTM1Q86UE6 522 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 VRK2Q86Y07 508 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 UEVLDQ8IX04 471 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 SYS1Q8N2H4 156 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 GPR137CQ8N3F9 429 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 PRSS35Q8N3Z0 413 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 EXD3Q8N9H8 876 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 BOLLQ8N9W6 283 aaKnown RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 MFSD9Q8NBP5 474 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 MORN4Q8NDC4 146 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 OR52L1Q8NGH7 329 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 OR51G2Q8NGK0 314 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 OR4C16Q8NGL9 310 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 OR10R2Q8NGX6 335 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 OR4K15Q8NH41 348 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 OR10J5Q8NHC4 309 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 DUSP19Q8WTR2 217 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 CA5BP1Q8WTZ4 195 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ING5Q8WYH8 240 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 SMIM19Q96E16 107 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 FBXO17Q96EF6 278 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 NEURL3Q96EH8 262 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 CPNE2Q96FN4 548 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 FAHD2AQ96GK7 314 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 WFIKKN1Q96NZ8 548 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 PHB2Q99623 299 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ZPBPQ9BS86 351 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 DDA1Q9BW61 102 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ZNF350Q9GZX5 532 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 LAT2Q9GZY6 243 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 FN3KRPQ9HA64 309 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 MEPEQ9NQ76 525 aaPredicted RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 CUTCQ9NTM9 273 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 A4GNTQ9UNA3 340 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ICKQ9UPZ9 632 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 GAB2Q9UQC2 676 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 FAM96BQ9Y3D0 163 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 FBXO7Q9Y3I1 522 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 CHTOPQ9Y3Y2 248 aaKnown RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 PDZD2O15018 2839 aa4.84□□□□□ -1.63
CLK1-202ENST00000409403 ZNF106Q9H2Y7 1883 aaKnown RBP4.84□□□□□ -1.63
CLK1-202ENST00000409403 A0A087WWC5 75 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms