RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 H3BNC9 293 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 POU3F2P20265 443 aaPredicted RBP15.97■□□□□ 0.15
SMPD4-202ENST00000409031 MAT1AQ00266 395 aaKnown RBP15.97■□□□□ 0.15
SMPD4-202ENST00000409031 MRPL58Q14197 206 aaKnown RBP15.97■□□□□ 0.15
SMPD4-202ENST00000409031 OR8G2PQ6IF36 304 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 TOMM20LQ6UXN7 152 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 PPP1R3BQ86XI6 285 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 GCNT2Q8N0V5 402 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 TXNIPQ9H3M7 391 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 ZDHHC11Q9H8X9 412 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 B9D1Q9UPM9 204 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 PIGLQ9Y2B2 252 aa15.97■□□□□ 0.15
SMPD4-202ENST00000409031 KNL1Q8NG31 2342 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 TNRC6CQ9HCJ0 1690 aaKnown RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 PTBP3O95758 552 aaKnown RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 OPN1LWP04000 364 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 PNRC1Q12796 327 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 FAM26DQ5JW98 314 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 THSD4Q6ZMP0 1018 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 ZNF574Q6ZN55 896 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 C12orf76Q8N812 135 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 HIPK2Q9H2X6 1198 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 LRIT1Q9P2V4 623 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 OPN1MWP04001 364 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 OPN1MW2P0DN77 364 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 OPN1MW3P0DN78 364 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 HTR5AP47898 357 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 WDR38Q5JTN6 314 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 OR4C5Q8NGB2 326 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 C22orf15Q8WYQ4 148 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 INTS12Q96CB8 462 aaKnown RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 CMBLQ96DG6 245 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 MAP3K3Q99759 626 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 ACTR3CQ9C0K3 210 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 RAB9BQ9NP90 201 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 ZNF331Q9NQX6 463 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 XKRY2A2RUG3 117 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 TOX4O94842 621 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 MGST1P10620 155 aaKnown RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 DAOP14920 347 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 CSRP3P50461 194 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 LBHQ53QV2 105 aaPredicted RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 Q6ZSR6 202 aa15.96■□□□□ 0.15
SMPD4-202ENST00000409031 MRPS24Q96EL2 167 aaKnown RBP15.96■□□□□ 0.15
SMPD4-202ENST00000409031 A0A087WUJ7 227 aa15.96■□□□□ 0.14
SMPD4-202ENST00000409031 NXPH3O95157 252 aa15.96■□□□□ 0.14
SMPD4-202ENST00000409031 SEMA4FO95754 770 aa15.96■□□□□ 0.14
SMPD4-202ENST00000409031 HPP00738 406 aa15.96■□□□□ 0.14
SMPD4-202ENST00000409031 HLA-DRB3P79483 266 aa15.96■□□□□ 0.14
SMPD4-202ENST00000409031 CLEC12BQ2HXU8 276 aa15.96■□□□□ 0.14
SMPD4-202ENST00000409031 ASTLQ6HA08 431 aaPredicted RBP15.96■□□□□ 0.14
SMPD4-202ENST00000409031 ZG16BQ96DA0 208 aa15.96■□□□□ 0.14
SMPD4-202ENST00000409031 FABP6P51161 128 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 HSD17B7P56937 341 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 NSUN5P2Q63ZY6 315 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 TFAP2EQ6VUC0 442 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 OR2A1Q8NGT9 310 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 SFXN1Q9H9B4 322 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 B4GALT7Q9UBV7 327 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 TCRBV21S2A2A0A5A6 115 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 P04436 131 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 IGFBP4P22692 258 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 HNRNPA3P51991 378 aaKnown RBP15.95■□□□□ 0.14
SMPD4-202ENST00000409031 TLE1Q04724 770 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 TMEM176BQ3YBM2 270 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-202ENST00000409031 RTL10Q7L3V2 364 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 LRRC18Q8N456 261 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 OR11G2Q8NGC1 345 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 WBP2Q969T9 261 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 RAB33BQ9H082 229 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 GPR84Q9NQS5 396 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 PARP11Q9NR21 331 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 RCL1Q9Y2P8 373 aaKnown RBP15.95■□□□□ 0.14
SMPD4-202ENST00000409031 OPRM1P35372 400 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 CLDN17P56750 224 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 CAPNS2Q96L46 248 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 MS4A10Q96PG2 267 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 TRPM3Q9HCF6 1732 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-202ENST00000409031 TMEM33P57088 247 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 SLC25A42Q86VD7 318 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 ZNF764Q96H86 408 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-202ENST00000409031 ADAT1Q9BUB4 502 aaKnown RBP15.95■□□□□ 0.14
SMPD4-202ENST00000409031 GPR87Q9BY21 358 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 SIRT7Q9NRC8 400 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 SIRT3Q9NTG7 399 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-202ENST00000409031 TRAPPC2LQ9UL33 140 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 MMACHCQ9Y4U1 282 aa15.95■□□□□ 0.14
SMPD4-202ENST00000409031 CCKARP32238 428 aa15.94■□□□□ 0.14
SMPD4-202ENST00000409031 C21orf62-AS1Q17RA5 79 aa15.94■□□□□ 0.14
SMPD4-202ENST00000409031 TMEM183BQ1AE95 376 aa15.94■□□□□ 0.14
SMPD4-202ENST00000409031 BCORP1Q8N888 145 aa15.94■□□□□ 0.14
SMPD4-202ENST00000409031 C19orf47Q8N9M1 422 aaKnown RBP15.94■□□□□ 0.14
SMPD4-202ENST00000409031 OR4D11Q8NGI4 311 aa15.94■□□□□ 0.14
SMPD4-202ENST00000409031 NANOS1Q8WY41 292 aaKnown RBP15.94■□□□□ 0.14
SMPD4-202ENST00000409031 NXPE3Q969Y0 559 aa15.94■□□□□ 0.14
SMPD4-202ENST00000409031 PINX1Q96BK5 328 aaKnown RBP15.94■□□□□ 0.14
SMPD4-202ENST00000409031 PBOV1Q9GZY1 135 aa15.94■□□□□ 0.14
SMPD4-202ENST00000409031 OTOL1A6NHN0 477 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-202ENST00000409031 LAMTOR1Q6IAA8 161 aa15.94■□□□□ 0.14
SMPD4-202ENST00000409031 C17orf99Q6UX52 265 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms