RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 BCL6BQ8N143 479 aaPredicted RBP16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 OR56B2PQ8NGI1 322 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 OR11L1Q8NGX0 322 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 ERGIC1Q969X5 290 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 NEIL1Q96FI4 390 aaPredicted RBP16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 JMJD8Q96S16 334 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 INTS14Q96SY0 518 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 AMELYQ99218 206 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 MRI1Q9BV20 369 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 ABHD6Q9BV23 337 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 SLC22A4Q9H015 551 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 MRPL15Q9P015 296 aaKnown RBP16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 ZNF69Q9UC07 566 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 NUP50Q9UKX7 468 aa16.11■□□□□ 0.17
SMARCB1-204ENST00000407422 GMDSO60547 372 aa16.1■□□□□ 0.17
SMARCB1-204ENST00000407422 GSTT1P30711 240 aa16.1■□□□□ 0.17
SMARCB1-204ENST00000407422 CX3CR1P49238 355 aa16.1■□□□□ 0.17
SMARCB1-204ENST00000407422 C12orf54Q6X4T0 127 aa16.1■□□□□ 0.17
SMARCB1-204ENST00000407422 DACT3Q96B18 629 aaPredicted RBP16.1■□□□□ 0.17
SMARCB1-204ENST00000407422 OR51V1Q9H2C8 321 aa16.1■□□□□ 0.17
SMARCB1-204ENST00000407422 GYG2O15488 501 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 TBX1O43435 398 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 GLCEO94923 617 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 PTBP3O95758 552 aaKnown RBP16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 ANXA2P07355 339 aaKnown RBP16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 PRKACGP22612 351 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 CPT2P23786 658 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 SLC15A1P46059 708 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 PITPNBP48739 271 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 GRB2P62993 217 aaKnown RBP16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 GINS1Q14691 196 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 TUSC1Q2TAM9 212 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 SFRP4Q6FHJ7 346 aaPredicted RBP16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 SPATA24Q86W54 205 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 TIGD4Q8IY51 512 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 SIGLECL1Q8N7X8 197 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 BOLLQ8N9W6 283 aaKnown RBP16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 OR8B3Q8NGG8 313 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 RNF133Q8WVZ7 376 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 SPSB4Q96A44 273 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 PLEKHA8Q96JA3 519 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 OR8B2Q96RD0 313 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 MARCH7Q9H992 704 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 FN3KRPQ9HA64 309 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 DNAJC27Q9NZQ0 273 aa16.09■□□□□ 0.17
SMARCB1-204ENST00000407422 IGHV2-70DA0A0C4DH43 119 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 E2F6O75461 281 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 FLOT2Q14254 428 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 PLBD1Q6P4A8 553 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 DCDC5Q6ZRR9 648 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 ZNF826PQ6ZT77 177 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 NLRC3Q7RTR2 1065 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 PRSS45Q7RTY3 260 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 BCAS4Q8TDM0 211 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 RAB40AQ8WXH6 277 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 SGK3Q96BR1 496 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 SLC7A6OSQ96CW6 309 aaPredicted RBP16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 ZMYND19Q96E35 227 aaPredicted RBP16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 FAM53CQ9NYF3 392 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 ZNF319Q9P2F9 582 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 RNF7Q9UBF6 113 aa16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 NOP16Q9Y3C1 178 aaKnown RBP16.08■□□□□ 0.17
SMARCB1-204ENST00000407422 IGHV3OR16-10A0A075B7F0 116 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 XRCC2O43543 280 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 GRPP07492 148 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 IGHV4-38-2P0DP08 117 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 HSD11B1P28845 292 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 FAM3AP98173 230 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 BTNL3Q6UXE8 466 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 ZNF841Q6ZN19 808 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 FAM57BQ71RH2 274 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 SLC16A9Q7RTY1 509 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 GCDHQ92947 438 aaPredicted RBP16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 NTN4Q9HB63 628 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 C1orf123Q9NWV4 160 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 CLN8Q9UBY8 286 aa16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 SOX21Q9Y651 276 aaPredicted RBP16.08■□□□□ 0.16
SMARCB1-204ENST00000407422 C3orf80F5H4A9 247 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 OSMP13725 252 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 PAICSP22234 425 aaKnown RBP16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 CFPP27918 469 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 PSMB10P40306 273 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 OPRL1P41146 370 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 ZNF121P58317 390 aaPredicted RBP16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 UBA52P62987 128 aaKnown RBP16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 TIGD6Q17RP2 521 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 DNAL1Q4LDG9 190 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 WDR25Q64LD2 544 aaPredicted RBP16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 LRRN1Q6UXK5 716 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 PLPP7Q8NBV4 271 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 REEP6Q96HR9 211 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 ZNF48Q96MX3 618 aaPredicted RBP16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 DUX5Q96PT3 197 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 TOR3AQ9H497 397 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 OPA3Q9H6K4 179 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 PPP1R3EQ9H7J1 279 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 BRD7Q9NPI1 651 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 POMPQ9Y244 141 aa16.07■□□□□ 0.16
SMARCB1-204ENST00000407422 KIR2DS1A0A191URI9 304 aa16.06■□□□□ 0.16
SMARCB1-204ENST00000407422 TCRBV3S1A0A5B6 114 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms