RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 RGS7BPQ6MZT1 257 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 LRFN4Q6PJG9 635 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 IGFL2Q6UWQ7 119 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 LINC00696Q6ZRV3 163 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 C12orf45Q8N5I9 185 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RNF138Q8WVD3 245 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 NKX3-1Q99801 234 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 REG4Q9BYZ8 158 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SH2D2AQ9NP31 389 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CHST11Q9NPF2 352 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 HPF1Q9NWY4 346 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CHCHD2Q9Y6H1 151 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 SESN1Q9Y6P5 492 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 EXPH5Q8NEV8 1989 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RFPL4AA6NLU0 287 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RFPL4AL1F8VTS6 287 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 TP53I11O14683 189 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 H2BFMP0C1H6 154 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CD96P40200 585 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 MMP16P51512 607 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CXADRP78310 365 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 HSF1Q00613 529 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 FMODQ06828 376 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 CLVS2Q5SYC1 327 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 LYPD6Q86Y78 171 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 KDM8Q8N371 416 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 OR10G3Q8NGC4 313 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RNF133Q8WVZ7 376 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 HAS2Q92819 552 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 DDIT4LQ96D03 193 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 TINAGL1Q9GZM7 467 aaPredicted RBP14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 RAB22AQ9UL26 194 aa14.09□□□□□ -0.15
CHRFAM7A-203ENST00000401522 LOC105371267A0A1B0GV96 52 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 METTL21EPA6NDL7 271 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 DISC1C4P0D8 188 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 M0QYG6 137 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 WDPCPO95876 746 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FCER2P06734 321 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZNF735P0CB33 412 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 GPR85P60893 370 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 TBR1Q16650 682 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 LPCAT3Q6P1A2 487 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 TMEM81Q6P7N7 255 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 LINC00346Q8IVM7 164 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PAQR8Q8TEZ7 354 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 RHBDD3Q9Y3P4 386 aa14.08□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SCO1O75880 301 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MPZP25189 248 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 HSD11B1P28845 292 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 AGTR1P30556 359 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CASRP41180 1078 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 POU3F1Q03052 451 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZMYND11Q15326 602 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ATPAF1Q5TC12 328 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ZNF584Q8IVC4 421 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR6K3Q8NGY3 331 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 AQP3Q92482 292 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ARL5BQ96KC2 179 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MFFQ9GZY8 342 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ALKBH4Q9NXW9 302 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SLC2A8Q9NY64 477 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 LRFN1Q9P244 771 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PFDN2Q9UHV9 154 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 GDF2Q9UK05 429 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PTPRQQ9UMZ3 2332 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 P2RY10O00398 339 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 NEURL1O76050 574 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 POU3F2P20265 443 aaPredicted RBP14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 BDKRB2P30411 391 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SORDQ00796 357 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SRSF4Q08170 494 aaKnown RBP14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FGL1Q08830 312 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ALKAL2Q6UX46 152 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 TMED4Q7Z7H5 227 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SLC51BQ86UW2 128 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SLC38A6Q8IZM9 456 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 BPIFB2Q8N4F0 458 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR10H5Q8NGA6 315 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 COQ8AQ8NI60 647 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 RELTQ969Z4 430 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 C5orf34Q96MH7 638 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PRRT1Q99946 306 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 GAL3ST1Q99999 423 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FANCFQ9NPI8 374 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CENPMQ9NSP4 180 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 FAM206AQ9NX38 181 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 PLA2G3Q9NZ20 509 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 B3GALT5Q9Y2C3 310 aa14.07□□□□□ -0.16
CHRFAM7A-203ENST00000401522 OR5H15A6NDH6 313 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 ETV2O00321 342 aaPredicted RBP14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SCGNO76038 276 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 BPNT1O95861 308 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 CD8AP01732 235 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 MOGAT2Q3SYC2 334 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 LY6G6FQ5SQ64 297 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 SPINK14Q6IE38 97 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 KLHL24Q6TFL4 600 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 IGFL3Q6UXB1 125 aa14.06□□□□□ -0.16
CHRFAM7A-203ENST00000401522 GALNT11Q8NCW6 608 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms