RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ISPDA4D126 451 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MAGEB4O15481 346 aaPredicted RBP11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 APOL3O95236 402 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 BAG2O95816 211 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 APOC1P02654 83 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 SRP9P49458 86 aaKnown RBP11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MMP16P51512 607 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 CDH15P55291 814 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 CXCR4P61073 352 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 LINC01356Q8N9X3 169 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 OR52H1Q8NGJ2 320 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 OR51G2Q8NGK0 314 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 OR8J1Q8NGP2 316 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 FAM81AQ8TBF8 368 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 C1orf159Q96HA4 380 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PGAM5Q96HS1 289 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 KCNS2Q9ULS6 477 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ORC6Q9Y5N6 252 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 NPTNQ9Y639 398 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 TANC2Q9HCD6 1990 aa11.88□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ZNF205O95201 554 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 CYB5R3P00387 301 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 SBK2P0C263 348 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PMELP40967 661 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 RAD23AP54725 363 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PSMA6P60900 246 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 CDC42P60953 191 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 SLC3A1Q07837 685 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 OR8G1Q15617 311 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 KCTD18Q6PI47 426 aaPredicted RBP11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 IL17RELQ6ZVW7 336 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PEG10Q86TG7 708 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MOGAT3Q86VF5 341 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 GID4Q8IVV7 300 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 SLC35F2Q8IXU6 374 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 EME1Q96AY2 570 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 HRASLS5Q96KN8 279 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 GAL3ST1Q99999 423 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ADAT1Q9BUB4 502 aaKnown RBP11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 C9orf16Q9BUW7 83 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MROQ9BYG7 248 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 OR10A2Q9H208 303 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PPP1R3EQ9H7J1 279 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ZNF665Q9H7R5 613 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 SP140LQ9H930 580 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 UFSP2Q9NUQ7 469 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 HAO2Q9NYQ3 351 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 UBAP1Q9NZ09 502 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 AASSQ9UDR5 926 aa11.87□□□□□ -0.51
HLA-DQB1-202ENST00000399079 hCG_38984A0A1B0GV85 526 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 B4DSR2 109 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 E9PQ18 207 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 TMEM178BH3BS89 294 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 IGHV2-70P01814 119 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 IGHV2-5P01817 119 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 GSK3AP49840 483 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 HOXA4Q00056 320 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ROM1Q03395 351 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ZMYND11Q15326 602 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MPPED2Q15777 294 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PRAMEF6Q5VXH4 476 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ZNF322Q6U7Q0 402 aaPredicted RBP11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ZBTB49Q6ZSB9 765 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ZNF679Q8IYX0 411 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 OR8B12Q8NGG6 310 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 STMN2Q93045 179 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PPP1R14AQ96A00 147 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 LYZL4Q96KX0 146 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 OR8B4Q96RC9 309 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MBOAT4Q96T53 435 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 TBX5Q99593 518 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 APOL4Q9BPW4 351 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 OPA3Q9H6K4 179 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 NIPAL2Q9H841 368 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 FAM206AQ9NX38 181 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 IMPAD1Q9NX62 359 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MRPL15Q9P015 296 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 IKZF2Q9UKS7 526 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 TMEM14AQ9Y6G1 99 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 TMEM269A0A1B0GVZ9 245 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 GMDSO60547 372 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 HTR1FP30939 366 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 CD200P41217 278 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 CHRFAM7AQ494W8 412 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 FAM201AQ5SY85 155 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 FAM120AOSQ5T036 256 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 DEGS2Q6QHC5 323 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PLEKHG7Q6ZR37 379 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 SSX6Q7RTT6 188 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ASB17Q8WXJ9 295 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 CLN6Q9NWW5 311 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 TMEM160Q9NX00 188 aa11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 WARS2Q9UGM6 360 aaKnown RBP11.86□□□□□ -0.51
HLA-DQB1-202ENST00000399079 PNPP00491 289 aa11.85□□□□□ -0.51
HLA-DQB1-202ENST00000399079 MSMBP08118 114 aa11.85□□□□□ -0.51
HLA-DQB1-202ENST00000399079 ACKR3P25106 362 aa11.85□□□□□ -0.51
HLA-DQB1-202ENST00000399079 DDOSTP39656 456 aa11.85□□□□□ -0.51
HLA-DQB1-202ENST00000399079 GATA4P43694 442 aa11.85□□□□□ -0.51
HLA-DQB1-202ENST00000399079 BTG1P62324 171 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms