RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FAAP20Q6NZ36 180 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 OCEL1Q9H607 264 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 PILRBQ9UKJ0 227 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 URGCP-MRPS24S4R325 110 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 FRG2CA6NGY1 282 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 SLC31A2O15432 143 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 FABP1P07148 127 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 THBS1P07996 1170 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 ACKR3P25106 362 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 NKX2-1P43699 371 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 B4GALNT1Q00973 533 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 DHRS4L2Q6PKH6 230 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 TVP23CQ96ET8 276 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 PCYT1BQ9Y5K3 369 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 PLXNA1Q9UIW2 1896 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 SSSCA1O60232 199 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 IAPPP10997 89 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 FCARP24071 287 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 ZDHHC23Q8IYP9 409 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 OR10R2Q8NGX6 335 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 SPACA9Q96E40 222 aaPredicted RBP12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 PTDSS2Q9BVG9 487 aa12.85□□□□□ -0.35
PCDHA11-201ENST00000398640 OR5H15A6NDH6 313 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 OR5H14A6NHG9 310 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 OR5H1A6NKK0 313 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 AQP7P3A6NL99 342 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 TSTD3H0UI37 97 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 PMS2P2O95744 297 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 CTRB1P17538 263 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 CTRB2Q6GPI1 263 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 NANOGP1Q8N7R0 232 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 RNF141Q8WVD5 230 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 NDUFB3O43676 98 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 PEX11BO96011 259 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 HLA-HP01893 362 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 FOSL1P15407 271 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 RPS19P39019 145 aaKnown RBP12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 MLF1P58340 268 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 CSRP2Q16527 193 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 LRRC10Q5BKY1 277 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 PWWP2BQ6NUJ5 590 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 ZNF573Q86YE8 665 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 ARIH2OSQ8N7S6 290 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 TAF9BQ9HBM6 251 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 MYO7AQ13402 2215 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 SNRPGP62308 76 aaKnown RBP12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 SOHLH1Q5JUK2 328 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 MRGPRX4Q96LA9 322 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 SLCO5A1Q9H2Y9 848 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 HINT3Q9NQE9 182 aaKnown RBP12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 ZNF391Q9UJN7 358 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 FLVCR1Q9Y5Y0 555 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 UPK1AO00322 258 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 PLPPR2Q96GM1 343 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 ESRP2Q9H6T0 727 aaKnown RBP12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 TNFRSF12AQ9NP84 129 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 B3GALT5Q9Y2C3 310 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 BOLA1Q9Y3E2 137 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 IGHV5-10-1A0A0J9YXX1 117 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 XKR7Q5GH72 579 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 PXT1Q8NFP0 134 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 OR10G3Q8NGC4 313 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 PHYHIPQ92561 330 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 COX14Q96I36 57 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 GNRHR2Q96P88 292 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 ATF6BQ99941 703 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 KCNIP2Q9NS61 270 aa12.84□□□□□ -0.35
PCDHA11-201ENST00000398640 HMX2A2RU54 273 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 CCL4P13236 92 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 DUSP1P28562 367 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM41BQ5BJD5 291 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 ST8SIA1Q92185 356 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 CCL17Q92583 94 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 GUCD1Q96NT3 240 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 PBOV1Q9GZY1 135 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 SLC22A13Q9Y226 551 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 PRSS37A4D1T9 235 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 IGHV4-34P06331 123 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 PI3P19957 117 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 CTU2Q2VPK5 515 aaKnown RBP12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 WDR88Q6ZMY6 472 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 PRSS42Q7Z5A4 293 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 OR13F1Q8NGS4 319 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 NUDT9Q9BW91 350 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 A0A087WZY1 265 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 PNLIPP16233 465 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 TAF9Q16594 264 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 ISXQ2M1V0 245 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 OR2AK2Q8NG84 335 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 OR8U1Q8NH10 309 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 OR52I2Q8NH67 350 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 ZCCHC14Q8WYQ9 949 aaKnown RBP12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 YIPF5Q969M3 257 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 MED9Q9NWA0 146 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 GAB2Q9UQC2 676 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 PARP14Q460N5 1801 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 MEX3AA1L020 520 aaKnown RBP12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 TMEM235A6NFC5 223 aa12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 SPRY1O43609 319 aaPredicted RBP12.83□□□□□ -0.36
PCDHA11-201ENST00000398640 CHRM2P08172 466 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms