RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 TMEM269A0A1B0GVZ9 245 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 VWC2LB2RUY7 222 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 KRT8P05787 483 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 DBTP11182 482 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 ACHEP22303 614 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 GIFP27352 417 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 DCTDP32321 178 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 NR4A2P43354 598 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 ADARB1P78563 741 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 SPRNQ5BIV9 151 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 PLEKHG7Q6ZR37 379 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 OR56B2PQ8NGI1 322 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 NRG4Q8WWG1 115 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 ZNF275Q9NSD4 429 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 TMEM100Q9NV29 134 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 CR1P17927 2039 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 ZANQ9Y493 2812 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 CSPG4Q6UVK1 2322 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 A0A096LNT2 108 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 hCG_38984A0A1B0GV85 526 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 H0YL77 283 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 MLNRO43193 412 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 RP2O75695 350 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 CFL1P23528 166 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 CAPGP40121 348 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 CRYBB2P43320 205 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 ACTC1P68032 377 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 ACTA1P68133 377 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 FAM3AP98173 230 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 MFGE8Q08431 387 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 RIN1Q13671 783 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 ZNF540Q8NDQ6 660 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 SETD9Q8NE22 299 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 LGALS12Q96DT0 336 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 RGCCQ9H4X1 137 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 AMBNQ9NP70 447 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 GTF2A1LQ9UNN4 478 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 CACNG2Q9Y698 323 aa17.98■□□□□ 0.47
TSPAN4-206ENST00000397408 WBP4O75554 376 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 HLA-DPB1P04440 258 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 ZNF85Q03923 595 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 YIPF7Q8N8F6 280 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 CNIH3Q8TBE1 160 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 ITLN1Q8WWA0 313 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 OR2V2Q96R30 315 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 SMR3AQ99954 134 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 PBOV1Q9GZY1 135 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 TREM2Q9NZC2 230 aa17.97■□□□□ 0.47
TSPAN4-206ENST00000397408 TLN2Q9Y4G6 2542 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 ACOD1A6NK06 481 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 LOC110117498-PIK3R3F6TDL0 507 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 H0YAE9 185 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 J3QRE1 110 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 PNPP00491 289 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 USF1P22415 310 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 CA6P23280 308 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 MMP16P51512 607 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 IL18R1Q13478 541 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 SMN1Q16637 294 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 HFEQ30201 348 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 LYZL4Q96KX0 146 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 ADAT1Q9BUB4 502 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 MOB1AQ9H8S9 216 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 MRPL15Q9P015 296 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 IL19Q9UHD0 177 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 NUFIP1Q9UHK0 495 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 EXOGQ9Y2C4 368 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 RPL36Q9Y3U8 105 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 PCDHGB1Q9Y5G3 927 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 R4GMQ9 66 aa17.96■□□□□ 0.47
TSPAN4-206ENST00000397408 IGHV4-61A0A0C4DH41 118 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 A0A1B0GWJ7 208 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 DAPL1A0PJW8 107 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 METTL15A6NJ78 407 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 F5H5P2 479 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 SRSF10O75494 262 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 RPP14O95059 124 aaKnown RBP17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 GNAO1P09471 354 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 TNFRSF1AP19438 455 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 DDOSTP39656 456 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 GPR6P46095 362 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 GSK3AP49840 483 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 LOXL1Q08397 574 aaPredicted RBP17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 OR8G1Q15617 311 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 ZNF684Q5T5D7 378 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 BIVMQ86UB2 503 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 MEGF10Q96KG7 1140 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 SLC22A4Q9H015 551 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 ZNF391Q9UJN7 358 aa17.95■□□□□ 0.46
TSPAN4-206ENST00000397408 TANC2Q9HCD6 1990 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 PPIHO43447 177 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 SULT1C4O75897 302 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 AQP4P55087 323 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 ISL1P61371 349 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 HNRNPA0Q13151 305 aaKnown RBP17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 TP53I3Q53FA7 332 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 BCL2L15Q5TBC7 163 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 LIPNQ5VXI9 398 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 FAM220AQ7Z4H9 259 aa17.94■□□□□ 0.46
TSPAN4-206ENST00000397408 COMMD2Q86X83 199 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms