RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 THAP3Q8WTV1 239 aaPredicted RBP13.92□□□□□ -0.18
HOXA3-202ENST00000396352 DCUN1D4Q92564 292 aa13.92□□□□□ -0.18
HOXA3-202ENST00000396352 TMEM100Q9NV29 134 aa13.92□□□□□ -0.18
HOXA3-202ENST00000396352 TMEM218A2RU14 115 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 ABOP16442 354 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 SUMO3P55854 103 aaPredicted RBP13.91□□□□□ -0.18
HOXA3-202ENST00000396352 TAS2R31P59538 309 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 ZNF101Q8IZC7 436 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 CARFQ8N187 725 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 TSTD1Q8NFU3 115 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 TERB2Q8NHR7 220 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 C5orf66Q9H5L9 145 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 CYTL1Q9NRR1 136 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 B3GALT5Q9Y2C3 310 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 METTL12A8MUP2 240 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 H0YIZ8 118 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 GPR31O00270 319 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 SOCS1O15524 211 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 OR3A4PP47883 348 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 CX3CR1P49238 355 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 GLIPR1L1Q6UWM5 242 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 ZSCAN4Q8NAM6 433 aaPredicted RBP13.91□□□□□ -0.18
HOXA3-202ENST00000396352 SLC30A7Q8NEW0 376 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 ROBO4Q8WZ75 1007 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 ZNF501Q96CX3 271 aaPredicted RBP13.91□□□□□ -0.18
HOXA3-202ENST00000396352 PISDQ9UG56 409 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 UNC13CQ8NB66 2214 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 CEACAM18A8MTB9 384 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 ETV2O00321 342 aaPredicted RBP13.91□□□□□ -0.18
HOXA3-202ENST00000396352 RAD51DO75771 328 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 ACTL6AO96019 429 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 AKR1C2P52895 323 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 AKR1C1Q04828 323 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 PNLIPRP3Q17RR3 467 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 TMEM128Q5BJH2 165 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 VAX1Q5SQQ9 334 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 TMPRSS9Q7Z410 1059 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 OR10Z1Q8NGY1 313 aa13.91□□□□□ -0.18
HOXA3-202ENST00000396352 MRPS28Q9Y2Q9 187 aaKnown RBP13.91□□□□□ -0.18
HOXA3-202ENST00000396352 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 CDC14BO60729 498 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 CHRM2P08172 466 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 CD79AP11912 226 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 HIST1H1DP16402 221 aaKnown RBP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 ZNF17P17021 662 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 ZNF20P17024 532 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 HNRNPKP61978 463 aaKnown RBP eCLIP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 PLXDC1Q8IUK5 500 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 PUSL1Q8N0Z8 303 aaKnown RBP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 NFAM1Q8NET5 270 aaPredicted RBP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 OR5T2Q8NGG2 359 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 SLC39A1Q9NY26 324 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 SEMA5BQ9P283 1151 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 ZNF319Q9P2F9 582 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 GPR132Q9UNW8 380 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 RPH3AQ9Y2J0 694 aaPredicted RBP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 VSTM2BA6NLU5 285 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 GSTP1P09211 210 aaKnown RBP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 H2AFB1P0C5Y9 115 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 TPT1P13693 172 aaKnown RBP13.9□□□□□ -0.18
HOXA3-202ENST00000396352 TMEM50BP56557 158 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 BHLHE23Q8NDY6 225 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 OR8B12Q8NGG6 310 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 ELP5Q8TE02 316 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 RNF138Q8WVD3 245 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 RAB3CQ96E17 227 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 CHRDQ9H2X0 955 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 MOB1AQ9H8S9 216 aa13.9□□□□□ -0.18
HOXA3-202ENST00000396352 ZNF878C9JN71 531 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 PGA4P0DJD7 388 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 PGA3P0DJD8 388 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 SLC2A1P11166 492 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 NAAAQ02083 359 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 MYBPHQ13203 477 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 MFAP5Q13361 173 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 RAB30Q15771 203 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 GUCA2BQ16661 112 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 THEM4Q5T1C6 240 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 NAA40Q86UY6 237 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 GTPBP8Q8N3Z3 284 aaPredicted RBP13.89□□□□□ -0.19
HOXA3-202ENST00000396352 SRPK3Q9UPE1 567 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 A0A1W2PP11 408 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 MPIG6BO95866 241 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 CDAP32320 146 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 NPY4RP50391 375 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 P2RY4P51582 365 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 SRSF3P84103 164 aaKnown RBP13.89□□□□□ -0.19
HOXA3-202ENST00000396352 ABHD12BQ7Z5M8 362 aaPredicted RBP13.89□□□□□ -0.19
HOXA3-202ENST00000396352 BAP18Q8IXM2 172 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 PAQR8Q8TEZ7 354 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 TSNAXQ99598 290 aaKnown RBP13.89□□□□□ -0.19
HOXA3-202ENST00000396352 BANF2Q9H503 90 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 FGF21Q9NSA1 209 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 SIGLEC6O43699 453 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 DUX1O43812 170 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 NXPH1P58417 271 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 SUPT4H1P63272 117 aaKnown RBP13.89□□□□□ -0.19
HOXA3-202ENST00000396352 CLEC18BQ6UXF7 455 aa13.89□□□□□ -0.19
HOXA3-202ENST00000396352 ARRDC1Q8N5I2 433 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms