RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 C9orf139Q6ZV77 190 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 HS3ST5Q8IZT8 346 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 CANT1Q8WVQ1 401 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 RNF133Q8WVZ7 376 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 SPRYD4Q8WW59 207 aaPredicted RBP13.46□□□□□ -0.25
CXCL12-206ENST00000395795 SGK3Q96BR1 496 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 CCDC124Q96CT7 223 aaKnown RBP13.46□□□□□ -0.25
CXCL12-206ENST00000395795 JMJD8Q96S16 334 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 COPS4Q9BT78 406 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 ABHD6Q9BV23 337 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 MRPL15Q9P015 296 aaKnown RBP13.46□□□□□ -0.25
CXCL12-206ENST00000395795 OR5V1Q9UGF6 321 aa13.46□□□□□ -0.25
CXCL12-206ENST00000395795 IGHV3OR16-10A0A075B7F0 116 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 ZNF878C9JN71 531 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 HAX1O00165 279 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 GMDSO60547 372 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 LHBP01229 141 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 EGR1P18146 543 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 FPR2P25090 351 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 GRK5P34947 590 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 OPRL1P41146 370 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 PITPNBP48739 271 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 ACTG1P63261 375 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 FAM3AP98173 230 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 GK3PQ14409 553 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 OR8G1Q15617 311 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 AWAT1Q58HT5 328 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 ARMCX4Q5H9R4 360 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 SPATC1Q76KD6 591 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 DPY19L4Q7Z388 723 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 C1orf87Q8N0U7 546 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 GCSAMQ8N6F7 178 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 PLPP7Q8NBV4 271 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 GIPC3Q8TF64 312 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 ADAT1Q9BUB4 502 aaKnown RBP13.45□□□□□ -0.26
CXCL12-206ENST00000395795 SLC22A4Q9H015 551 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 NTN4Q9HB63 628 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 SMURF1Q9HCE7 757 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 CENPMQ9NSP4 180 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 RNF7Q9UBF6 113 aa13.45□□□□□ -0.26
CXCL12-206ENST00000395795 hCG_38984A0A1B0GV85 526 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 DNAJC9-AS1A6NH13 148 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 LRRC30A6NM36 301 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 LGALS8O00214 317 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 GNB2P62879 340 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 ELF3P78545 371 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-206ENST00000395795 LRRN1Q6UXK5 716 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 SLC16A9Q7RTY1 509 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 PARP8Q8N3A8 854 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 OR8B3Q8NGG8 313 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 OR6K6Q8NGW6 343 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 GCDHQ92947 438 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-206ENST00000395795 SLC7A6OSQ96CW6 309 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-206ENST00000395795 DUX5Q96PT3 197 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 OR8B2Q96RD0 313 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 THTPAQ9BU02 230 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 MRI1Q9BV20 369 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 FGF23Q9GZV9 251 aaPredicted RBP13.44□□□□□ -0.26
CXCL12-206ENST00000395795 PRDM13Q9H4Q3 707 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 KLHDC2Q9Y2U9 406 aa13.44□□□□□ -0.26
CXCL12-206ENST00000395795 GGT3PA6NGU5 568 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 AQP12BA6NM10 295 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 RIIAD1A6NNX1 92 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.43□□□□□ -0.26
CXCL12-206ENST00000395795 PHYHO14832 338 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 GLCEO94923 617 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 CST1P01037 141 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 MMP9P14780 707 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 PRTN3P24158 256 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 GSTT1P30711 240 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 CX3CR1P49238 355 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 CDK5Q00535 292 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 EIF2B1Q14232 305 aaKnown RBP13.43□□□□□ -0.26
CXCL12-206ENST00000395795 SFRP4Q6FHJ7 346 aaPredicted RBP13.43□□□□□ -0.26
CXCL12-206ENST00000395795 FAM90A1Q86YD7 464 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 AQP12AQ8IXF9 295 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 BCAS4Q8TDM0 211 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 TAF15Q92804 592 aaKnown RBP eCLIP13.43□□□□□ -0.26
CXCL12-206ENST00000395795 INTS14Q96SY0 518 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 NUDT16L1Q9BRJ7 211 aaKnown RBP13.43□□□□□ -0.26
CXCL12-206ENST00000395795 FN3KRPQ9HA64 309 aa13.43□□□□□ -0.26
CXCL12-206ENST00000395795 MDFIC2A0A1B0GVS7 189 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 TCRBV3S1A0A5B6 114 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 C3orf80F5H4A9 247 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 CLDN34H7C241 214 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 XRCC2O43543 280 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 SELENOFO60613 162 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 IFNGP01579 166 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 HKR1P10072 659 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 ZNF3P17036 446 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 PRKACGP22612 351 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 SLC2A5P22732 501 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 BLVRAP53004 296 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 ZNF121P58317 390 aaPredicted RBP13.42□□□□□ -0.26
CXCL12-206ENST00000395795 GRB2P62993 217 aaKnown RBP13.42□□□□□ -0.26
CXCL12-206ENST00000395795 GINS1Q14691 196 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 RHOUQ7L0Q8 258 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 ERI1Q8IV48 349 aaKnown RBP13.42□□□□□ -0.26
CXCL12-206ENST00000395795 FGFRL1Q8N441 504 aa13.42□□□□□ -0.26
CXCL12-206ENST00000395795 PAPD5Q8NDF8 572 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms