RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 REG4Q9BYZ8 158 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 SP140LQ9H930 580 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 MYOZ1Q9NP98 299 aaPredicted RBP16.91■□□□□ 0.3
SNCA-203ENST00000394986 ZDHHC8Q9ULC8 765 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 GTF2A1LQ9UNN4 478 aa16.91■□□□□ 0.3
SNCA-203ENST00000394986 hCG_38984A0A1B0GV85 526 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 LOC390937A0A1W2PQ73 354 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 SRSF10O75494 262 aaKnown RBP16.9■□□□□ 0.3
SNCA-203ENST00000394986 RPP14O95059 124 aaKnown RBP16.9■□□□□ 0.3
SNCA-203ENST00000394986 ATP6V1G2O95670 118 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 HLA-DPB1P04440 258 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 ISL1P61371 349 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 FAM3AP98173 230 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 ZNF684Q5T5D7 378 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 YIPF7Q8N8F6 280 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 DVL3Q92997 716 aaPredicted RBP16.9■□□□□ 0.3
SNCA-203ENST00000394986 C18orf12Q96KH6 178 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 LYZL4Q96KX0 146 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 SLC30A2Q9BRI3 323 aa16.9■□□□□ 0.3
SNCA-203ENST00000394986 EXOGQ9Y2C4 368 aaKnown RBP16.9■□□□□ 0.3
SNCA-203ENST00000394986 A0A096LNT2 108 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 IGHV3-64DA0A0J9YX35 117 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 RP2O75695 350 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 KRT8P05787 483 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 CD55P08174 381 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 ZNF829Q3KNS6 432 aaPredicted RBP16.89■□□□□ 0.29
SNCA-203ENST00000394986 TP53I3Q53FA7 332 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 C6orf52Q5T4I8 152 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 LURAP1LQ8IV03 231 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 SETD9Q8NE22 299 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 OR13G1Q8NGZ3 307 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 ITLN1Q8WWA0 313 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 DIRC2Q96SL1 478 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 SMR3AQ99954 134 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 BPESC1Q9GZL8 116 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 PBOV1Q9GZY1 135 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 OPA3Q9H6K4 179 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 ZNF275Q9NSD4 429 aaPredicted RBP16.89■□□□□ 0.29
SNCA-203ENST00000394986 TMEM100Q9NV29 134 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 MYRFQ9Y2G1 1151 aa16.89■□□□□ 0.29
SNCA-203ENST00000394986 IGHV1-69-2A0A0G2JMI3 117 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 DAPL1A0PJW8 107 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 METTL15A6NJ78 407 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 VWC2LB2RUY7 222 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 F5H5P2 479 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 H0YAE9 185 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 SLC25A16P16260 332 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 CA6P23280 308 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 DCTDP32321 178 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 GSK3AP49840 483 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 OR2V2Q96R30 315 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 SIGLEC11Q96RL6 698 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 EGLN1Q9GZT9 426 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 ACOXLQ9NUZ1 547 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 GNG8Q9UK08 70 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 R4GMQ9 66 aa16.88■□□□□ 0.29
SNCA-203ENST00000394986 TEP1Q99973 2627 aaKnown RBP16.88■□□□□ 0.29
SNCA-203ENST00000394986 LOC110117498-PIK3R3F6TDL0 507 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 NDUFS8O00217 210 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 INHBBP09529 407 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 ACHEP22303 614 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 TNFSF4P23510 183 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 CRYBB2P43320 205 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 NR4A2P43354 598 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 MMP16P51512 607 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 ACTC1P68032 377 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 ACTA1P68133 377 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 IL18R1Q13478 541 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 RIPK1Q13546 671 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 RIN1Q13671 783 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 LIPNQ5VXI9 398 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 C8orf59Q8N0T1 100 aaPredicted RBP16.87■□□□□ 0.29
SNCA-203ENST00000394986 ACBD7Q8N6N7 88 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 OR52I1Q8NGK6 324 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 TFAP2CQ92754 450 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 CHODLQ9H9P2 273 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 G6PC2Q9NQR9 355 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 DCAF16Q9NXF7 216 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 NUFIP1Q9UHK0 495 aaKnown RBP16.87■□□□□ 0.29
SNCA-203ENST00000394986 RRP15Q9Y3B9 282 aaKnown RBP16.87■□□□□ 0.29
SNCA-203ENST00000394986 RPL36Q9Y3U8 105 aaKnown RBP16.87■□□□□ 0.29
SNCA-203ENST00000394986 TTRP02766 147 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 ACKR3P25106 362 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 GIFP27352 417 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 PSMB10P40306 273 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 MRPS11P82912 194 aaKnown RBP16.87■□□□□ 0.29
SNCA-203ENST00000394986 LAIR2Q6ISS4 152 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 LHFPL3Q86UP9 236 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 COMMD2Q86X83 199 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 OR51E1Q8TCB6 317 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 CCL17Q92583 94 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 MEGF10Q96KG7 1140 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 ADAT1Q9BUB4 502 aaKnown RBP16.87■□□□□ 0.29
SNCA-203ENST00000394986 GSX1Q9H4S2 264 aaPredicted RBP16.87■□□□□ 0.29
SNCA-203ENST00000394986 RGCCQ9H4X1 137 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 PPP1R3EQ9H7J1 279 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 OR52A1Q9UKL2 312 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 SLC22A13Q9Y226 551 aa16.87■□□□□ 0.29
SNCA-203ENST00000394986 IGHV4-61A0A0C4DH41 118 aa16.86■□□□□ 0.29
SNCA-203ENST00000394986 A0A1B0GWJ7 208 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms