RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 REPIN1Q9BWE0 567 aaKnown RBP6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 PRRG3Q9BZD7 231 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 ZNF665Q9H7R5 613 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 ADGRL4Q9HBW9 690 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 GCM1Q9NP62 436 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 TMEM106BQ9NUM4 274 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 UFSP2Q9NUQ7 469 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 TMEM100Q9NV29 134 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 IL19Q9UHD0 177 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 PPP1R3CQ9UQK1 317 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 CSPG4Q6UVK1 2322 aa6.47□□□□□ -1.37
HMGB3P1-201ENST00000393368 TLN2Q9Y4G6 2542 aa6.46□□□□□ -1.37
HMGB3P1-201ENST00000393368 hCG_38984A0A1B0GV85 526 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 KIAA1324LA8MWY0 1029 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 IGHV2-70P01814 119 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 SBK2P0C263 348 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 TNFRSF1AP19438 455 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 CDH15P55291 814 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 PSMA6P60900 246 aaKnown RBP6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 CXCR4P61073 352 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 SEC61A1P61619 476 aaKnown RBP6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM3AP98173 230 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 MAB21L1Q13394 359 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZMYND11Q15326 602 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR8G1Q15617 311 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 MPPED2Q15777 294 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 CR1LQ2VPA4 569 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM120AOSQ5T036 256 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 NXNL2Q5VZ03 156 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 KRT77Q7Z794 578 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 SLC35F2Q8IXU6 374 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 PQLC1Q8N2U9 271 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 LINC01356Q8N9X3 169 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR8B12Q8NGG6 310 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 HPS1Q92902 700 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 RAB1CQ92928 201 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 SPSB4Q96A44 273 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 EME1Q96AY2 570 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 TIMD4Q96H15 378 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 LYZL4Q96KX0 146 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 GAL3ST1Q99999 423 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 APOL4Q9BPW4 351 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 YIPF3Q9GZM5 350 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR10A2Q9H208 303 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 TOR3AQ9H497 397 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 USE1Q9NZ43 259 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 H2AFY2Q9P0M6 372 aaPredicted RBP6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 IKZF2Q9UKS7 526 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 KCNS2Q9ULS6 477 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 NPTNQ9Y639 398 aa6.46□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMEM269A0A1B0GVZ9 245 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 A0A1B0GWJ7 208 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 SLC22A31A6NKX4 558 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 TMEM178BH3BS89 294 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 H3BSH0 61 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 XRCC2O43543 280 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM20BO75063 409 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 ENTPD6O75354 484 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 PNPP00491 289 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 IGHV2-5P01817 119 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 GRPP07492 148 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 ACKR3P25106 362 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 CD200P41217 278 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 SRP9P49458 86 aaKnown RBP6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 GSK3AP49840 483 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 RAD23AP54725 363 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 CDC42P60953 191 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 BTG1P62324 171 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 CHRFAM7AQ494W8 412 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 DMRTC1Q5HYR2 192 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 BRICD5Q6PL45 260 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF322Q6U7Q0 402 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF826PQ6ZT77 177 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 WDR86Q86TI4 376 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 GID4Q8IVV7 300 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 BOLLQ8N9W6 283 aaKnown RBP6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR10H4Q8NGA5 316 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 C1orf159Q96HA4 380 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 OR8B4Q96RC9 309 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 C9orf16Q9BUW7 83 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 BEX2Q9BXY8 128 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 FGF23Q9GZV9 251 aaPredicted RBP6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 HIF1ANQ9NWT6 349 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 FAM206AQ9NX38 181 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 IMPAD1Q9NX62 359 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 MRPL15Q9P015 296 aaKnown RBP6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 ENOPH1Q9UHY7 261 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 GTF2A1LQ9UNN4 478 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 RHBDD3Q9Y3P4 386 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 ORC6Q9Y5N6 252 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 C2CD3Q4AC94 2353 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 ABCA2Q9BZC7 2435 aa6.45□□□□□ -1.38
HMGB3P1-201ENST00000393368 NAV3Q8IVL0 2385 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 HIVEP2P31629 2446 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 A0A1W2PQL4 384 aaPredicted RBP6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 ANKRD30BLA7E2S9 258 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 B4DSR2 109 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 E9PQ18 207 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 ZNF670-ZNF695F2Z2N8 137 aa6.44□□□□□ -1.38
HMGB3P1-201ENST00000393368 PLPP2O43688 288 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms