RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 COPS3Q9UNS2 423 aa5.78□□□□□ -1.48
UBBP1-201ENST00000392399 KLHDC2Q9Y2U9 406 aa5.78□□□□□ -1.48
UBBP1-201ENST00000392399 VPS13CQ709C8 3753 aa5.78□□□□□ -1.48
UBBP1-201ENST00000392399 CELSR1Q9NYQ6 3014 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 PRRC2AP48634 2157 aaKnown RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 A0A1B0GWJ7 208 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 EFCAB10A6NFE3 127 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 TRIM64CA6NLI5 447 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CD300LBA8K4G0 201 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 NDUFS8O00217 210 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 TBX1O43435 398 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CLIC3O95833 236 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 IGHV4-39P01824 125 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 IGHA1P01876 353 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CD55P08174 381 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 GNAO1P09471 354 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 PIPP12273 146 aaPredicted RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 TNFSF4P23510 183 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 ALDH3B1P43353 468 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 ZNF92Q03936 586 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 GALEQ14376 348 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 HLXQ14774 488 aaPredicted RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 TIGD6Q17RP2 521 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SNAI3Q3KNW1 292 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CDONQ4KMG0 1287 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 GLYATL3Q5SZD4 288 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 LIPNQ5VXI9 398 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 OR2T2Q6IF00 324 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CLEC2AQ6UVW9 174 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 FAM57BQ71RH2 274 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 KLBQ86Z14 1044 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SYS1Q8N2H4 156 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 FTMTQ8N4E7 242 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 YIPF7Q8N8F6 280 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SPERTQ8NA61 448 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 ZNF540Q8NDQ6 660 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CCDC54Q8NEL0 328 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CSNK2A3Q8NEV1 391 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CNIH3Q8TBE1 160 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SPRYD4Q8WW59 207 aaPredicted RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SGK3Q96BR1 496 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 REEP6Q96HR9 211 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SORCS2Q96PQ0 1159 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SIGLEC11Q96RL6 698 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 TBX5Q99593 518 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SLC30A2Q9BRI3 323 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 RHNO1Q9BSD3 238 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 EGLN1Q9GZT9 426 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 POFUT1Q9H488 388 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 AMBNQ9NP70 447 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 DLL4Q9NR61 685 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 DECR2Q9NUI1 292 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 TMEM100Q9NV29 134 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 FAM206AQ9NX38 181 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CHCHD3Q9NX63 227 aaKnown RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 UBAP1Q9NZ09 502 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 CNOT2Q9NZN8 540 aaKnown RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 MRPL15Q9P015 296 aaKnown RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 AASSQ9UDR5 926 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 IL19Q9UHD0 177 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 NUFIP1Q9UHK0 495 aaKnown RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 MRM2Q9UI43 246 aaKnown RBP5.77□□□□□ -1.49
UBBP1-201ENST00000392399 SNX5Q9Y5X3 404 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 R4GMQ9 66 aa5.77□□□□□ -1.49
UBBP1-201ENST00000392399 LOC390937A0A1W2PQ73 354 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 GGT3PA6NGU5 568 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 PRR32B1ATL7 298 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 LOC110117498-PIK3R3F6TDL0 507 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 IFNL4K9M1U5 179 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 PSMD9O00233 223 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 SSX4O60224 188 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 GMDSO60547 372 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 MRPS14O60783 128 aaKnown RBP5.76□□□□□ -1.49
UBBP1-201ENST00000392399 FAM20BO75063 409 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 NDUFS7O75251 213 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 SRSF10O75494 262 aaKnown RBP5.76□□□□□ -1.49
UBBP1-201ENST00000392399 MTRF1O75570 445 aaKnown RBP5.76□□□□□ -1.49
UBBP1-201ENST00000392399 APOL3O95236 402 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 IGHV1-46P01743 117 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 CCDC159P0C7I6 412 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 SLC2A1P11166 492 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 NAT2P11245 290 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 DAOP14920 347 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 ZNF12P17014 697 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 TNFRSF1AP19438 455 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 CRYBB2P43320 205 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 MAP2K3P46734 347 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 PDLIM4P50479 330 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 CCR9P51686 369 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 TMEM33P57088 247 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 GABARAPL2P60520 117 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 FAM3AP98173 230 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 ZNF85Q03923 595 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 MZT1Q08AG7 82 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 OR8B8Q15620 311 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 SMN1Q16637 294 aaKnown RBP5.76□□□□□ -1.49
UBBP1-201ENST00000392399 CLEC12BQ2HXU8 276 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 ALKBH6Q3KRA9 238 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 Q5PR19 223 aa5.76□□□□□ -1.49
UBBP1-201ENST00000392399 RBM48Q5RL73 367 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms