RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 SLC6A17Q9H1V8 727 aa7.58□□□□□ -1.2
VPS36-201ENST00000378060 WSB2Q9NYS7 404 aaPredicted RBP7.58□□□□□ -1.2
VPS36-201ENST00000378060 DOCK8Q8NF50 2099 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 PPP5D1E7EU14 171 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 CTDSPLO15194 276 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 ICOSLGO75144 302 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 ZFPL1O95159 310 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 SCGB1D1O95968 90 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 BAXQ07812 192 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 BATFQ16520 125 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 ZNF239Q16600 458 aaKnown RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 FAM185AQ8N0U4 392 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 DMBX1Q8NFW5 382 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 OIT3Q8WWZ8 545 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 PP6455Q8WZ26 134 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 LURAP1Q96LR2 239 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 RP1P56715 2156 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 OTOL1A6NHN0 477 aaPredicted RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 H7BYZ3 331 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 CYB5BO43169 146 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 SCO1O75880 301 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 NXPH2O95156 264 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 CPN1P15169 458 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 ADIRFQ15847 76 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 DCAF12Q5T6F0 453 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 RPUSD3Q6P087 351 aaKnown RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 CORO6Q6QEF8 472 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 PARM1Q6UWI2 310 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 MAMSTRQ6ZN01 415 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 CCDC71Q8IV32 467 aaPredicted RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 OR4N2Q8NGD1 307 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 OR52B4Q8NGK2 314 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 STT3BQ8TCJ2 826 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 INTS12Q96CB8 462 aaKnown RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 DAZAP1Q96EP5 407 aaKnown RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 C4orf45Q96LM5 186 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 LRRC3BQ96PB8 259 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 ABHD1Q96SE0 405 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 BARHL1Q9BZE3 327 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 WWTR1Q9GZV5 400 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 RNF32Q9H0A6 362 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 HIPK2Q9H2X6 1198 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 OR51B6Q9H340 312 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 C12orf10Q9HB07 376 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 MMP25Q9NPA2 562 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 SIRT3Q9NTG7 399 aaPredicted RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 TIMM10BQ9Y5J6 103 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 COL4A3Q01955 1670 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 C4orf47A7E2U8 309 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 SDCBPO00560 298 aaPredicted RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 CD160O95971 181 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 HLA-DOBP13765 273 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 CASP6P55212 293 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 HLXQ14774 488 aaPredicted RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 SHBQ15464 509 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 CDONQ4KMG0 1287 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 LHFPL2Q6ZUX7 228 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 KMT5CQ86Y97 462 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 GRAMD2AQ8IUY3 354 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 ZNF808Q8N4W9 903 aaPredicted RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 OR10J5Q8NHC4 309 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 RIMS4Q9H426 269 aaPredicted RBP7.57□□□□□ -1.2
VPS36-201ENST00000378060 ADGRL4Q9HBW9 690 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 AK3Q9UIJ7 227 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 HDGFL3Q9Y3E1 203 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 SLCO1B1Q9Y6L6 691 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 V9GYH0 126 aa7.57□□□□□ -1.2
VPS36-201ENST00000378060 F6UZH7 168 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 GSTZ1O43708 216 aaPredicted RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 GLAP06280 429 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 GP1BAP07359 652 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 C9orf135Q5VTT2 229 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 OR52W1Q6IF63 320 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 C15orf54Q8N8G6 183 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 OR8D4Q8NGM9 314 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 CCL4L1Q8NHW4 92 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 ORAI1Q96D31 301 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 C6orf106Q9H6K1 298 aaPredicted RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 PATZ1Q9HBE1 687 aaKnown RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 NEU3Q9UQ49 428 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 ZFP92A6NM28 416 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 TO15178 435 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 NME2P1O60361 137 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 STK11Q15831 433 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 DMKNQ6E0U4 476 aaPredicted RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 HSD17B13Q7Z5P4 300 aaPredicted RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 CPEB2Q7Z5Q1 589 aaKnown RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 ZNF610Q8N9Z0 462 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 OR51F2Q8NH61 342 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 OR4A16Q8NH70 328 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 SUCNR1Q9BXA5 334 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 PLK3Q9H4B4 646 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 GPR173Q9NS66 373 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 HELZP42694 1942 aaKnown RBP7.56□□□□□ -1.2
VPS36-201ENST00000378060 C2orf72A6NCS6 295 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 OR6C68A6NDL8 312 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 LILRA5A6NI73 299 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 DCTN6O00399 190 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 MPPED1O15442 326 aa7.56□□□□□ -1.2
VPS36-201ENST00000378060 IGHA1P01876 353 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms