RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 MDH2P40926 338 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 PTGES3Q15185 160 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 TMEM155Q4W5P6 130 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 SLC35D3Q5M8T2 416 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 LCN1P1Q5VSP4 162 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 FAHD1Q6P587 224 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 MUC20Q8N307 709 aaPredicted RBP9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 BOLLQ8N9W6 283 aaKnown RBP9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 OR8S1Q8NH09 359 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 RNF133Q8WVZ7 376 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 TMEM158Q8WZ71 300 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 SIGLEC11Q96RL6 698 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 SLC22A4Q9H015 551 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 OPA3Q9H6K4 179 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 MARCH7Q9H992 704 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 LAMP5Q9UJQ1 280 aa9.74□□□□□ -0.85
SMARCE1-203ENST00000377808 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 hCG_1807616A0A1W2PRN6 198 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 A6NLC8 198 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 CEACAM18A8MTB9 384 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 FAM20BO75063 409 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 RGS9O75916 674 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 GRPP07492 148 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 RPS2P15880 293 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 ADRA2CP18825 462 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 OPRL1P41146 370 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 CD200P41217 278 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 HCCSP53701 268 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 SEC61A1P61619 476 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 ESRRGP62508 458 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 MAB21L1Q13394 359 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 ESCO2Q56NI9 601 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 FAM201AQ5SY85 155 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 LRRN1Q6UXK5 716 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 KRT77Q7Z794 578 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 LRRC28Q86X40 367 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 PARP8Q8N3A8 854 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 C19orf18Q8NEA5 215 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 OTOSQ8NHW6 89 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 REPIN1Q9BWE0 567 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 TTTY10Q9BZA0 68 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 C7orf69Q9H7B7 122 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 FN3KRPQ9HA64 309 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 PATZ1Q9HBE1 687 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 G6PC2Q9NQR9 355 aa9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 MRPL15Q9P015 296 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 H2AFY2Q9P0M6 372 aaPredicted RBP9.73□□□□□ -0.85
SMARCE1-203ENST00000377808 PPIAL4EA0A075B759 164 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 SAC3D1A6NKF1 404 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 PPIAL4DF5H284 164 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 PSMD9O00233 223 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 TCF21O43680 179 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 PRKYO43930 277 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 GMDSO60547 372 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 PPIAL4FP0DN26 164 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 SLC2A5P22732 501 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 ZFP36P26651 326 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 PMELP40967 661 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 MZT1Q08AG7 82 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 SCGB2A2Q13296 93 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 MPPED2Q15777 294 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 LIPNQ5VXI9 398 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 SLC16A9Q7RTY1 509 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 BCDIN3DQ7Z5W3 292 aaKnown RBP9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 COMMD2Q86X83 199 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 TEX29Q8N6K0 151 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 CELF2-AS1Q8N7Q2 184 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 TCEANCQ8N8B7 351 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 DEFB108BQ8NET1 73 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 OR52H1Q8NGJ2 320 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 PYDC1Q8WXC3 89 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 SGK3Q96BR1 496 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 RIBC2Q9H4K1 309 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 C1orf123Q9NWV4 160 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 OR5V1Q9UGF6 321 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 KLHDC2Q9Y2U9 406 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 PPIAL4AQ9Y536 164 aa9.72□□□□□ -0.85
SMARCE1-203ENST00000377808 CCDC182A6NF36 153 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 C3orf80F5H4A9 247 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 J3QLI3 93 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 AVPP01185 164 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 CFL1P23528 166 aaKnown RBP9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 CD80P33681 288 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 GNALP38405 381 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 GATA4P43694 442 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 GNB2P62879 340 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 FAM3AP98173 230 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 HOXA4Q00056 320 aaPredicted RBP9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 OR8B8Q15620 311 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 ZNF181Q2M3W8 571 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 SFRP4Q6FHJ7 346 aaPredicted RBP9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 NLRC3Q7RTR2 1065 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 KLBQ86Z14 1044 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 PHC2Q8IXK0 858 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 OR8B3Q8NGG8 313 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 ERGIC1Q969X5 290 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 SPSB4Q96A44 273 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 OR8B2Q96RD0 313 aa9.71□□□□□ -0.86
SMARCE1-203ENST00000377808 IL4I1Q96RQ9 567 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms