RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 C19orf25Q9UFG5 118 aaPredicted RBP11.5□□□□□ -0.57
GPC4-201ENST00000370828 TRBV5-4A0A0C4DH59 114 aa11.5□□□□□ -0.57
GPC4-201ENST00000370828 A0A1B0GTH9 108 aa11.5□□□□□ -0.57
GPC4-201ENST00000370828 GLTPD2A6NH11 291 aa11.5□□□□□ -0.57
GPC4-201ENST00000370828 TMIGD3P0DMS9 266 aaPredicted RBP11.5□□□□□ -0.57
GPC4-201ENST00000370828 PMS2P11Q13670 270 aa11.5□□□□□ -0.57
GPC4-201ENST00000370828 ENDOGQ14249 297 aaKnown RBP11.5□□□□□ -0.57
GPC4-201ENST00000370828 GKN2Q86XP6 184 aa11.5□□□□□ -0.57
GPC4-201ENST00000370828 MKXQ8IYA7 352 aa11.5□□□□□ -0.57
GPC4-201ENST00000370828 ZNF775Q96BV0 537 aaPredicted RBP11.5□□□□□ -0.57
GPC4-201ENST00000370828 CNRIP1Q96F85 164 aaPredicted RBP11.5□□□□□ -0.57
GPC4-201ENST00000370828 C20orf141Q9NUB4 165 aa11.5□□□□□ -0.57
GPC4-201ENST00000370828 OR14J1Q9UGF5 321 aa11.5□□□□□ -0.57
GPC4-201ENST00000370828 C9orf170A2RU37 121 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ZNF891A8MT65 544 aaPredicted RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 ADRA2CP18825 462 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ZNF90Q03938 601 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 MSMO1Q15800 293 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 SLC39A5Q6ZMH5 540 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 TMEM91Q6ZNR0 172 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 MRPL21Q7Z2W9 205 aaKnown RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 GRINAQ7Z429 371 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 OR51H1Q8NH63 302 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 OR51E1Q8TCB6 317 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 THOC3Q96J01 351 aaKnown RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 UCK1Q9HA47 277 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 RASL12Q9NYN1 266 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ZNF346Q9UL40 294 aaKnown RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 TRAV34A0A0B4J273 112 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 XKRY2A2RUG3 117 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 FAM221AA4D161 298 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 C9J4A7 227 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 HSD17B6O14756 317 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 GP1BAP07359 652 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ANKRD34CP0C6C1 535 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ACOT6Q3I5F7 207 aaPredicted RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 TMEM268Q5VZI3 342 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 RGS7BPQ6MZT1 257 aaPredicted RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 FAHD2BQ6P2I3 314 aaPredicted RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 Q6ZN92 141 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 WBP2Q969T9 261 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 FAHD2AQ96GK7 314 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 HHIPQ96QV1 700 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ZFP64Q9NPA5 681 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 TAF1P21675 1872 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 TMED7-TICAM2A0A0A6YYA0 188 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 CTAG2O75638 210 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 S100A7P31151 101 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 LSM11P83369 360 aaKnown RBP eCLIP11.49□□□□□ -0.57
GPC4-201ENST00000370828 ZNF385CQ66K41 422 aaPredicted RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 RABEPKQ7Z6M1 372 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ZNF485Q8NCK3 441 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 MS4A10Q96PG2 267 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 SDHCQ99643 169 aaPredicted RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 TMED7Q9Y3B3 224 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 KCNE1BA0A087WTH5 132 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 CST7O76096 145 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 MPGP29372 298 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ERVK-16P61578 105 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 B4GALNT1Q00973 533 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 PLGLB1Q02325 96 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 FFAR4Q5NUL3 377 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 PHF19Q5T6S3 580 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 PLXDC2Q6UX71 529 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 C17orf78Q8N4C9 275 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 RGP1Q92546 391 aaPredicted RBP11.49□□□□□ -0.57
GPC4-201ENST00000370828 SUSD2Q9UGT4 822 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 ENTPD2Q9Y5L3 495 aa11.49□□□□□ -0.57
GPC4-201ENST00000370828 CLDN34H7C241 214 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 GSTZ1O43708 216 aaPredicted RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 ADAP1O75689 374 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 UTS2O95399 124 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 NTN1O95631 604 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 CYB5R3P00387 301 aaPredicted RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 NPBWR1P48145 328 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 SULT1A1P50225 295 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 TIAL1Q01085 375 aaKnown RBP eCLIP11.48□□□□□ -0.57
GPC4-201ENST00000370828 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 OR4A4PQ8NGN8 299 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 OR51B6Q9H340 312 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 KCNK15Q9H427 330 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 C19orf53Q9UNZ5 99 aaPredicted RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 PCBP3P57721 371 aaKnown RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 SP6Q3SY56 376 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 CFAP161Q6P656 301 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 SNX22Q96L94 193 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 ADGRL4Q9HBW9 690 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 APOBEC3BQ9UH17 382 aaKnown RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 ABCD4O14678 606 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 SOX15O60248 233 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 EIF1BO60739 113 aaKnown RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 WNT11O96014 354 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 TBPP20226 339 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 EIF1P41567 113 aaKnown RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 PIGPP57054 158 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 RAB38P57729 211 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 MFAP5Q13361 173 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 SAMD13Q5VXD3 122 aa11.48□□□□□ -0.57
GPC4-201ENST00000370828 ZNF660Q6AZW8 331 aaPredicted RBP11.48□□□□□ -0.57
GPC4-201ENST00000370828 ANKRD16Q6P6B7 361 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms