RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 SLC26A1Q9H2B4 701 aa4.75□□□□□ -1.65
SMNDC1-202ENST00000369603 TMEM74BQ9NUR3 256 aa4.75□□□□□ -1.65
SMNDC1-202ENST00000369603 B3GAT1Q9P2W7 334 aa4.75□□□□□ -1.65
SMNDC1-202ENST00000369603 KCNS2Q9ULS6 477 aa4.75□□□□□ -1.65
SMNDC1-202ENST00000369603 SCN2AQ99250 2005 aa4.75□□□□□ -1.65
SMNDC1-202ENST00000369603 HELZP42694 1942 aaKnown RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 COL4A4P53420 1690 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 A0A1B0GUH1 482 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 PLSCR5A0PG75 271 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 SNRPGP15A8MWD9 76 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 K7ESF4 209 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 CTDSPLO15194 276 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 GLSO94925 669 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 RAC2P15153 192 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF44P15621 663 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 SELEP16581 610 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF16P17020 682 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 RAB6AP20340 208 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 NFYAP23511 347 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 CDAP32320 146 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 RGS19P49795 217 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 CLDN6P56747 220 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 FXYD4P59646 89 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 C19orf57Q0VDD7 668 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 RIN1Q13671 783 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF169Q14929 603 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 PPA1Q15181 289 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 TSC22D1Q15714 1073 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ANKRD16Q6P6B7 361 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 MDGA2Q7Z553 956 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ASB13Q8WXK3 278 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ROBO4Q8WZ75 1007 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 UPRTQ96BW1 309 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF845Q96IR2 970 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 RADILQ96JH8 1075 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 FAM117AQ9C073 453 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 DEFB127Q9H1M4 99 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF275Q9NSD4 429 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ST6GALNAC2Q9UJ37 374 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 CACNA1IQ9P0X4 2223 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 IGHV1-45A0A0A0MS14 117 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 A0A0D9SG52 128 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC22A20A6NK97 555 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 TMEM229AB2RXF0 380 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 NRASP01111 189 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 TPOP07202 933 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 B4GALT1P15291 398 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 TNFSF4P23510 183 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 PNLIPRP3Q17RR3 467 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 FJX1Q86VR8 437 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 TMEM185AQ8NFB2 350 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 OR10D3Q8NH80 312 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ORAI1Q96D31 301 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 RRNAD1Q96FB5 475 aaKnown RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 REEP6Q96HR9 211 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF426Q9BUY5 554 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ZMAT3Q9HA38 289 aaKnown RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 CRLF2Q9HC73 371 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 OBP2BQ9NPH6 170 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 GPR27Q9NS67 375 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 FRRS1LQ9P0K9 344 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 TRGV5A0A0B4J1U4 118 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 TMEM235A6NFC5 223 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 NPIPB13A6NJU9 1138 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 LEUTXA8MZ59 168 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 NPIPB4C9JG80 1138 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 M0QYG6 137 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 PLA2G10O15496 165 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 SEMA7AO75326 666 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 IGHV3-9P01782 118 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 GIPP09681 153 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 CCL3P10147 92 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 AVPR2P30518 371 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 MMP16P51512 607 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 RPS18P62269 152 aaKnown RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 RPS4XP62701 263 aaKnown RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 SRPXP78539 464 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 SLC26A10Q8NG04 563 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 OR10R2Q8NGX6 335 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 STOML3Q8TAV4 291 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ALKBH3Q96Q83 286 aaPredicted RBP4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 SPSB2Q99619 263 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 SEC22CQ9BRL7 303 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 ANGPTL4Q9BY76 406 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 C12orf49Q9H741 205 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 GPR173Q9NS66 373 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 TAS2R5Q9NYW4 299 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 OR5V1Q9UGF6 321 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 DOCK8Q8NF50 2099 aa4.74□□□□□ -1.65
SMNDC1-202ENST00000369603 IGLV3-12A0A075B6K2 115 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF816-ZNF321PA0A0X1KG74 233 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF705EA8MWA4 302 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 TGFBR3LH3BV60 316 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 GSTZ1O43708 216 aaPredicted RBP4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 DHRS3O75911 302 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 GPANK1O95872 356 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 THY1P04216 161 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 ZNF250P15622 560 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 DCTDP32321 178 aa4.73□□□□□ -1.65
SMNDC1-202ENST00000369603 NOVA1P51513 510 aaKnown RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms