RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 BORCS7Q96B45 105 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 RNF167Q9H6Y7 350 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 CHODLQ9H9P2 273 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 C1orf123Q9NWV4 160 aa10.39□□□□□ -0.75
SYNE1-204ENST00000367248 A0A1B0GTH9 108 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 B4E171 279 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 HLA-HP01893 362 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 CD82P27701 267 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 TSPAN7P41732 249 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 GPM6AP51674 278 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 SLC25A1P53007 311 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 SORDQ00796 357 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 DCAF10Q5QP82 559 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 RHNO1Q9BSD3 238 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 TPPP3Q9BW30 176 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF318Q5VUA4 2279 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 AIPO00170 330 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 RRAS2P62070 204 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-204ENST00000367248 FMODQ06828 376 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 GAB4Q2WGN9 574 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 SPNS3Q6ZMD2 512 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 SLC25A26Q70HW3 274 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 RIMS4Q9H426 269 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-204ENST00000367248 ANKRD31Q8N7Z5 1873 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 CTXN2P0C2S0 81 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 SFTPCP11686 197 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 DUSP1P28562 367 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 TAF9Q16594 264 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF674Q2M3X9 581 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 MRGPREQ86SM8 312 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 OR1F12Q8NHA8 337 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 NMNAT2Q9BZQ4 307 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 UNC13CQ8NB66 2214 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF816-ZNF321PA0A0X1KG74 233 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 A0A1W2PQD3 144 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 OR2M5A3KFT3 312 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 IFITM5A6NNB3 132 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 NDUFB3O43676 98 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 IGHV3-13P01766 116 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 IGHV3-7P01780 117 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 NPY4RP50391 375 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 BCL2A1Q16548 175 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 LHFPL2Q6ZUX7 228 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 ZDHHC23Q8IYP9 409 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 C10orf90Q96M02 699 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 METTL17Q9H7H0 456 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-204ENST00000367248 WDR54Q9H977 334 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 TPT1P13693 172 aaKnown RBP10.38□□□□□ -0.75
SYNE1-204ENST00000367248 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-204ENST00000367248 TFAP2EQ6VUC0 442 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 MDFIC2A0A1B0GVS7 189 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 PHF1O43189 567 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-204ENST00000367248 WDR1O75083 606 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 CD1EP15812 388 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 GNG10P50151 68 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF121P58317 390 aaPredicted RBP10.38□□□□□ -0.75
SYNE1-204ENST00000367248 STAC2Q6ZMT1 411 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 LGI3Q8N145 548 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 MAFIPQ8WZ33 124 aa10.38□□□□□ -0.75
SYNE1-204ENST00000367248 TMEM235A6NFC5 223 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 PNLIPP16233 465 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 ATF4P18848 351 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 PEBP1P30086 187 aaKnown RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SLC35G3Q8N808 338 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 OR10J5Q8NHC4 309 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 FYTTD1Q96QD9 318 aaKnown RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 EP300Q09472 2414 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 GABRA4P48169 554 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 CD226Q15762 336 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 IAH1Q2TAA2 248 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SLC22A18ASQ8N1D0 253 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 PTPMT1Q8WUK0 201 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 OPA3Q9H6K4 179 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 TAAR3PQ9P1P4 343 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 WNT1P04628 370 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 GNB3P16520 340 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 GK2Q14410 553 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 GABRG1Q8N1C3 465 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 ZNF501Q96CX3 271 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 AHCTF1Q8WYP5 2266 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 GLAP06280 429 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 ELK1P19419 428 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SLC37A1P57057 533 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 FABP5Q01469 135 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 ARL11Q969Q4 196 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SEH1LQ96EE3 360 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SSX3Q99909 188 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 PLEKHF2Q9H8W4 249 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SCN1AP35498 2009 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 TRBV5-3A0A0A0MS03 114 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 S100PP25815 95 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 CDK5Q00535 292 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 LRRC10Q5BKY1 277 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 TMEM217Q8N7C4 229 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SEC22AQ96IW7 307 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 SPRY1O43609 319 aaPredicted RBP10.37□□□□□ -0.75
SYNE1-204ENST00000367248 FAHP16930 419 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 DDOSTP39656 456 aa10.37□□□□□ -0.75
SYNE1-204ENST00000367248 DRAM2Q6UX65 266 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms