RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 NPIPB4C9JG80 1138 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 PLPP3O14495 311 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 ZNF28P17035 718 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 NAAAQ02083 359 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 SQSTM1Q13501 440 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 PPP1R1AQ13522 171 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 WDR74Q6RFH5 385 aaPredicted RBP13.09□□□□□ -0.31
PRKN-204ENST00000366896 GRINAQ7Z429 371 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 PLXDC1Q8IUK5 500 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 OR51A2Q8NGJ7 313 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 TREM1Q9NP99 234 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 ACKR4Q9NPB9 350 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 CUTCQ9NTM9 273 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 DHCR7Q9UBM7 475 aaKnown RBP13.09□□□□□ -0.31
PRKN-204ENST00000366896 LRP12Q9Y561 859 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 TMED7-TICAM2A0A0A6YYA0 188 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 TEX13DA0A0J9YY54 714 aaPredicted RBP13.08□□□□□ -0.32
PRKN-204ENST00000366896 A0A1W2PQM1 296 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 C9orf170A2RU37 121 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 ZNF208O43345 1280 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 SMIM6P0DI80 62 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 PGAM2P15259 253 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 PTGFRP43088 359 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 CXADRP78310 365 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 CCL7P80098 99 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 EIF2B1Q14232 305 aaKnown RBP13.08□□□□□ -0.32
PRKN-204ENST00000366896 MEF2DQ14814 521 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 IGSF11Q5DX21 431 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 GLYATL3Q5SZD4 288 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 C1orf140Q5VVS0 124 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 IL34Q6ZMJ4 242 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 ZNF704Q6ZNC4 412 aaPredicted RBP13.08□□□□□ -0.32
PRKN-204ENST00000366896 BAP18Q8IXM2 172 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 PRSS58Q8IYP2 241 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 CARFQ8N187 725 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 NANPQ8TBE9 248 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 DAZLQ92904 295 aaKnown RBP13.08□□□□□ -0.32
PRKN-204ENST00000366896 NUDT22Q9BRQ3 303 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 CRB3Q9BUF7 120 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 TBL1XR1Q9BZK7 514 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 OR11A1Q9GZK7 315 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 CST11Q9H112 138 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 ZMAT3Q9HA38 289 aaKnown RBP13.08□□□□□ -0.32
PRKN-204ENST00000366896 KLK13Q9UKR3 277 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 TMED7Q9Y3B3 224 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 PCNX3Q9H6A9 2034 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 CPAMD8Q8IZJ3 1885 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 A6NIZ1 184 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 FAM25EA8MYX2 175 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 FOLR2P14207 255 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 NFYBP25208 207 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 RAP1BP61224 184 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 RAP1AP62834 184 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 ZP4Q12836 540 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 OR7A5Q15622 319 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 PNLIPRP3Q17RR3 467 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 HLA-DQA1Q5Y7H0 255 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 ZNF441Q8N8Z8 693 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 OR4K17Q8NGC6 315 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 SLC25A44Q96H78 314 aaPredicted RBP13.08□□□□□ -0.32
PRKN-204ENST00000366896 PHB2Q99623 299 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 TMEM231Q9H6L2 316 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 RNF122Q9H9V4 155 aa13.08□□□□□ -0.32
PRKN-204ENST00000366896 MRPS18BQ9Y676 258 aaKnown RBP13.08□□□□□ -0.32
PRKN-204ENST00000366896 KCNAB3O43448 404 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 LMX1BO60663 402 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 IL11P20809 199 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 PLCXD2Q0VAA5 305 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 PJVKQ0ZLH3 352 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 MST1LQ2TV78 715 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 MOGAT2Q3SYC2 334 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 FAM209BQ5JX69 171 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 TMEM244Q5VVB8 128 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 OR10K2Q6IF99 312 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 PAPD4Q6PIY7 484 aaKnown RBP13.07□□□□□ -0.32
PRKN-204ENST00000366896 TMPRSS9Q7Z410 1059 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 KDM8Q8N371 416 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 GPR119Q8TDV5 335 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 MRGPRFQ96AM1 343 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 PRRT1Q99946 306 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 SLC22A11Q9NSA0 550 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 ATXN7L1Q9ULK2 861 aaPredicted RBP13.07□□□□□ -0.32
PRKN-204ENST00000366896 RHBDD3Q9Y3P4 386 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 COLCA2A8K830 154 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 PROB1E7EW31 1015 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 CRHP06850 196 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 FABP1P07148 127 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 FAM157CP0CG43 387 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 HLA-DOBP13765 273 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 ACP1P24666 158 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 SLC26A5P58743 744 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 IL13RA1P78552 427 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 PMPCAQ10713 525 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 HABP2Q14520 560 aaPredicted RBP13.07□□□□□ -0.32
PRKN-204ENST00000366896 NKAPLQ5M9Q1 402 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 DNM1P34Q6PK57 102 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 RHOUQ7L0Q8 258 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 MISPQ8IVT2 679 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 ZDHHC22Q8N966 263 aa13.07□□□□□ -0.32
PRKN-204ENST00000366896 NRIP2Q9BQI9 281 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms