RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 UPRTQ96BW1 309 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CCDC124Q96CT7 223 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 SLC7A6OSQ96CW6 309 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 LRGUKQ96M69 825 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 C1orf147Q96MC9 270 aaPredicted RBP11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 AMELYQ99218 206 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 COPS4Q9BT78 406 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 THTPAQ9BU02 230 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 OPA3Q9H6K4 179 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 MED20Q9H944 212 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 CENPMQ9NSP4 180 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 OR5V1Q9UGF6 321 aa11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 NOP16Q9Y3C1 178 aaKnown RBP11.4□□□□□ -0.58
TNFRSF1A-202ENST00000366159 RIIAD1A6NNX1 92 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 XRCC2O43543 280 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GLCEO94923 617 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 LHBP01229 141 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZNF3P17036 446 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 HOXB6P17509 224 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GNB2P62879 340 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 UBA52P62987 128 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GRB2P62993 217 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FAM3AP98173 230 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CDK5Q00535 292 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ARMCX4Q5H9R4 360 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 WDR25Q64LD2 544 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 LRRN1Q6UXK5 716 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C12orf54Q6X4T0 127 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C9orf139Q6ZV77 190 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DPY19L4Q7Z388 723 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 BCL6BQ8N143 479 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SIGLECL1Q8N7X8 197 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PAPD5Q8NDF8 572 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR6K6Q8NGW6 343 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TEX47Q8TBZ9 253 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SGK3Q96BR1 496 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZNF48Q96MX3 618 aaPredicted RBP11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 INTS14Q96SY0 518 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ADAT1Q9BUB4 502 aaKnown RBP11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 MRI1Q9BV20 369 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TOR3AQ9H497 397 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 UFSP2Q9NUQ7 469 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZNF319Q9P2F9 582 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 RNF7Q9UBF6 113 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DOCK11Q5JSL3 2073 aa11.39□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TCRBV3S1A0A5B6 114 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GGT3PA6NGU5 568 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DYNC1I1O14576 645 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PLATP00750 562 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GSTT1P30711 240 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 DDOSTP39656 456 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OPRL1P41146 370 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SLC15A1P46059 708 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PITPNBP48739 271 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 EIF2B1Q14232 305 aaKnown RBP11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GINS1Q14691 196 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 KLHL12Q53G59 568 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SLC16A9Q7RTY1 509 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TRPM8Q7Z2W7 1104 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C11orf53Q8IXP5 236 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 HS3ST5Q8IZT8 346 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SPERTQ8NA61 448 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C19orf18Q8NEA5 215 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR8B3Q8NGG8 313 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR56B2PQ8NGI1 322 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR11L1Q8NGX0 322 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PLEKHA8Q96JA3 519 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR8B2Q96RD0 313 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FN3KRPQ9HA64 309 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PDP1Q9P0J1 537 aaPredicted RBP11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CTSZQ9UBR2 303 aa11.38□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PKD1L1Q8TDX9 2849 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 hCG_38984A0A1B0GV85 526 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 H3BN98 237 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 LGALS8O00214 317 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PHYHO14832 338 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 FCN3O75636 299 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 IGHV4-38-2P0DP08 117 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OSMP13725 252 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 IRF2P14316 349 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CX3CR1P49238 355 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TAF13Q15543 124 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SPATC1Q76KD6 591 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SHFQ7M4L6 423 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 NLRC3Q7RTR2 1065 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 WDR86Q86TI4 376 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ERI1Q8IV48 349 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 GCSAMQ8N6F7 178 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 OR6N2Q8NGY6 317 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 CLN8Q9UBY8 286 aa11.37□□□□□ -0.59
TNFRSF1A-202ENST00000366159 C22orf46C9J442 243 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 APOC1P02654 83 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PRKACGP22612 351 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 SLC2A5P22732 501 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 PRTN3P24158 256 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 NPY4RP50391 375 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ZNF121P58317 390 aaPredicted RBP11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 ACTG1P63261 375 aa11.36□□□□□ -0.59
TNFRSF1A-202ENST00000366159 TEX36Q5VZQ5 186 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms