RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 H0YIV9 168 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 XRCC2O43543 280 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 TMEM230Q96A57 120 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 HHIPQ96QV1 700 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 PRSS16Q9NQE7 514 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 CDK2AP1O14519 115 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 HS3ST1O14792 307 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 EIF4E2O60573 245 aaKnown RBP12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 DOC2BQ14184 412 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 H1FNTQ75WM6 255 aaPredicted RBP12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 OR10C1Q96KK4 312 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 PCNX2A6NKB5 2137 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 ELOA3CA0A087WX78 387 aaPredicted RBP12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 CRYAAP02489 173 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 TNFRSF1AP19438 455 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 PPP2CAP67775 309 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 NCMAPQ5T1S8 102 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 C2orf50Q96LR7 162 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 PACRGQ96M98 296 aaPredicted RBP12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 LYRM4Q9HD34 91 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 KIF13BQ9NQT8 1826 aa12.04□□□□□ -0.48
SRGAP3-201ENST00000360413 A0A1B0GX78 115 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 EFSO43281 561 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 PCP4P48539 62 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 COX20Q5RI15 118 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 SLC39A5Q6ZMH5 540 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 MAVSQ7Z434 540 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 TREX1Q9NSU2 369 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 COX7A2P2O60397 106 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 SOD1P00441 154 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 KIR2DS2P43631 304 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 MAT1AQ00266 395 aaKnown RBP12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 MUC15Q8N387 334 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 OR1L1Q8NH94 360 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 C19orf43Q9BQ61 176 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 AMMECR1Q9Y4X0 333 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 ARSAP15289 507 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 ZNF468Q5VIY5 522 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 CYHR1Q6ZMK1 362 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 TEX29Q8N6K0 151 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 PIGTQ969N2 578 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 GPR87Q9BY21 358 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 TAS2R4Q9NYW5 299 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 ZNF785A8K8V0 405 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 IAPPP10997 89 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 INPP5JQ15735 1006 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 C11orf87Q6NUJ2 197 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 TRAT1Q6PIZ9 186 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 LIPIQ6XZB0 460 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 GPX8Q8TED1 209 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 UTS2O95399 124 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 HERVK_113P61574 105 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 C1QTNF12Q5T7M4 302 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 ATOH1Q92858 354 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 MRPS24Q96EL2 167 aaKnown RBP12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 PDLIM5Q96HC4 596 aaKnown RBP12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 SLC35B3Q9H1N7 401 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 ZNF552Q9H707 407 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 CACNA1BQ00975 2339 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 MS4A18H0YCH9 400 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 MS4A18Q3C1V0 323 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 TMEM56Q96MV1 263 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 KCNK15Q9H427 330 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 A4GALTQ9NPC4 353 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 SLCO3A1Q9UIG8 710 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 ANKRD36A6QL64 1941 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 OR5G3P0C626 314 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 ATOH8Q96SQ7 321 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 FBXO4Q9UKT5 387 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 MAST2Q6P0Q8 1798 aa12.03□□□□□ -0.48
SRGAP3-201ENST00000360413 RGPD2P0DJD1 1756 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 CTSLP07711 333 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 EDDM3AQ14507 147 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 C9orf135Q5VTT2 229 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 LRP11Q86VZ4 500 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 MSL2Q9HCI7 577 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 TMEM9BQ9NQ34 198 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 PSENENQ9NZ42 101 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 TIMM10BQ9Y5J6 103 aa12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 COL2A1P02458 1487 aaPredicted RBP12.02□□□□□ -0.48
SRGAP3-201ENST00000360413 WDR73Q6P4I2 378 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 GDF7Q7Z4P5 450 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 TUSC5Q8IXB3 177 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 BADQ92934 168 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 TPSD1Q9BZJ3 242 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 M0QZQ0 153 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 FCN1O00602 326 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 HPP00738 406 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 CDCA4Q9BXL8 241 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 ARFGEF3Q5TH69 2177 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 TRGV10A0A0A0MS01 117 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 DCXRQ7Z4W1 244 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 PIANPQ8IYJ0 282 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 GALMQ96C23 342 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 HDAC8Q9BY41 377 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 AKIRIN1Q9H9L7 192 aaPredicted RBP12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 GYPAP02724 150 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 SLC35E2P0CK97 266 aa12.02□□□□□ -0.49
SRGAP3-201ENST00000360413 ELOBQ15370 118 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms