RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 GYG2O15488 501 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 GLCEO94923 617 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 PTBP3O95758 552 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 PPIAL4FP0DN26 164 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF3P17036 446 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 EGR1P18146 543 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 SLC2A5P22732 501 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 GSTT1P30711 240 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 CX3CR1P49238 355 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 HCCSP53701 268 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 MALLQ13021 153 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 OR8G1Q15617 311 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 ZSCAN26Q16670 478 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 Q8TCH9 128 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 RNF133Q8WVZ7 376 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 SPRYD4Q8WW59 207 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 SPSB4Q96A44 273 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 SGK3Q96BR1 496 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 C1orf147Q96MC9 270 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 ADAT1Q9BUB4 502 aaKnown RBP13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 FGF23Q9GZV9 251 aaPredicted RBP13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 ZNF69Q9UC07 566 aa13.96□□□□□ -0.17
PDLIM7-201ENST00000355572 GGT3PA6NGU5 568 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 M0R129 80 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 TNFRSF13BO14836 293 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 GSC2O15499 205 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 TIPRLO75663 272 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 IFNGP01579 166 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 OSMP13725 252 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 RPS2P15880 293 aaKnown RBP13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 OPRL1P41146 370 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 ZNF121P58317 390 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 FAM3AP98173 230 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 PAX8Q06710 450 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 SFRP4Q6FHJ7 346 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 SLC16A9Q7RTY1 509 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 CPOQ8IVL8 374 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 C11orf53Q8IXP5 236 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 FGFRL1Q8N441 504 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 NANPQ8TBE9 248 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 SSBP3Q9BWW4 388 aaPredicted RBP13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 PPIAL4AQ9Y536 164 aa13.95□□□□□ -0.18
PDLIM7-201ENST00000355572 hCG_38984A0A1B0GV85 526 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 CCDC182A6NF36 153 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 C22orf46C9J442 243 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 GNGT2O14610 69 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 TBX1O43435 398 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 MITFO75030 526 aaPredicted RBP13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 DNAJC8O75937 253 aaPredicted RBP13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 IGHV4-38-2P0DP08 117 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 GATA3P23771 443 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 NAA10P41227 235 aaPredicted RBP13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 DAPP51397 102 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 POU4F2Q12837 409 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 ESCO2Q56NI9 601 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 FAM57BQ71RH2 274 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 BCDIN3DQ7Z5W3 292 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 MUC20Q8N307 709 aaPredicted RBP13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 GCSAMQ8N6F7 178 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 CELF2-AS1Q8N7Q2 184 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 BOLLQ8N9W6 283 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 TAF15Q92804 592 aaKnown RBP eCLIP13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 UTP4Q969X6 686 aaKnown RBP13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 SEH1LQ96EE3 360 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 LYZL4Q96KX0 146 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 SMURF1Q9HCE7 757 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 BRD7Q9NPI1 651 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 AUP1Q9Y679 476 aa13.94□□□□□ -0.18
PDLIM7-201ENST00000355572 A0A0A6YYJ9 748 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 IGHV2-70DA0A0C4DH43 119 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 A0A1B0GW55 424 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 ANXA2P07355 339 aaKnown RBP13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX4L2P0CJ85 424 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX4L3P0CJ86 424 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX4L4P0CJ87 422 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX4L5P0CJ88 424 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX4L6P0CJ89 424 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX4L7P0CJ90 424 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 EPHA2P29317 976 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 PSMB10P40306 273 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 BNIP1Q12981 228 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 GK3PQ14409 553 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 TAF13Q15543 124 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DNAL1Q4LDG9 190 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX4L9Q6RFH8 374 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 USP43Q70EL4 1123 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 SIGLECL1Q8N7X8 197 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 NEIL1Q96FI4 390 aaPredicted RBP13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 REEP6Q96HR9 211 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX5Q96PT3 197 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 RASSF4Q9H2L5 321 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 SLC25A19Q9HC21 320 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DNAJB9Q9UBS3 223 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 DUX4Q9UBX2 424 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 LRCH1Q9Y2L9 728 aa13.93□□□□□ -0.18
PDLIM7-201ENST00000355572 IGHV3OR15-7A0A075B7D8 119 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 MDFIC2A0A1B0GVS7 189 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 PRR23D1E9PI22 279 aaPredicted RBP13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 IFNL4K9M1U5 179 aa13.92□□□□□ -0.18
PDLIM7-201ENST00000355572 PSMD9O00233 223 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms