RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 HLA-GP17693 338 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 IL11P20809 199 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 EFNA3P52797 238 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 RAC3P60763 192 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 ZP1P60852 638 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 MRPS34P82930 218 aaKnown RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 FMODQ06828 376 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR8B8Q15620 311 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 GRK1Q15835 563 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 SGCAQ16586 387 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 GLIPR1L1Q6UWM5 242 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 PLXDC2Q6UX71 529 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 FAM57BQ71RH2 274 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 C1orf210Q8IVY1 113 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 BEST3Q8N1M1 668 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 WDSUB1Q8N9V3 476 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR8B12Q8NGG6 310 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR51A4Q8NGJ6 313 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR5M8Q8NGP6 311 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR4K15Q8NH41 348 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR2V1Q8NHB1 315 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 ELMOD3Q96FG2 381 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 LIN37Q96GY3 246 aaPredicted RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 OCSTAMPQ9BR26 566 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 DPCDQ9BVM2 203 aaPredicted RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 TM2D1Q9BX74 207 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 CHIAQ9BZP6 476 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 NMES1Q9C002 83 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 PARPBPQ9NWS1 579 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 SLC23A1Q9UHI7 598 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 SLC7A11Q9UPY5 501 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 NOP16Q9Y3C1 178 aaKnown RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 EXPH5Q8NEV8 1989 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 THADAQ6YHU6 1953 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 PLSCR5A0PG75 271 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 POM121CA8CG34 1229 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 ADRB1P08588 477 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 ZNF35P13682 527 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 HIST1H1DP16402 221 aaKnown RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 POU3F2P20265 443 aaPredicted RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 CD82P27701 267 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 SELENOPP49908 381 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 FOXK1P85037 733 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 ETFDHQ16134 617 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 CARD17Q5XLA6 110 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 NHLRC1Q6VVB1 395 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 INO80EQ8NBZ0 244 aaPredicted RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 SEMA6DQ8NFY4 1073 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR6K3Q8NGY3 331 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR10AC1Q8NH08 325 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR8S1Q8NH09 359 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR14L1PQ8NHC6 308 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 OR51E1Q8TCB6 317 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 MRPS24Q96EL2 167 aaKnown RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 LINC00470Q9BZP3 86 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 CHST5Q9GZS9 411 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 RNF122Q9H9V4 155 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 PADI1Q9ULC6 663 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 LOXL2Q9Y4K0 774 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 TIMM10BQ9Y5J6 103 aa3.3□□□□□ -1.88
RNF38-203ENST00000353739 MRPS18BQ9Y676 258 aaKnown RBP3.3□□□□□ -1.88
RNF38-203ENST00000353739 ARHGEF17Q96PE2 2063 aaPredicted RBP3.29□□□□□ -1.88
RNF38-203ENST00000353739 CSMD2Q7Z408 3487 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 hCG_1807616A0A1W2PRN6 198 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 KRBOX1C9JBD0 128 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 SMLR1H3BR10 107 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 RRP8O43159 456 aaKnown RBP3.29□□□□□ -1.88
RNF38-203ENST00000353739 TIAF1O95411 115 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 IGLV3-1P01715 115 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 AMY2BP19961 511 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 ZP3P21754 424 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 CARD18P57730 90 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 SNRPD2P62316 118 aaKnown RBP3.29□□□□□ -1.88
RNF38-203ENST00000353739 QRFPP83859 136 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 EXOSC2Q13868 293 aaKnown RBP3.29□□□□□ -1.88
RNF38-203ENST00000353739 LGALSLQ3ZCW2 172 aaPredicted RBP3.29□□□□□ -1.88
RNF38-203ENST00000353739 CHRFAM7AQ494W8 412 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 SCGB2B2Q4G0G5 96 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 TRIM61Q5EBN2 209 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 RIPPLY2Q5TAB7 128 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 FAM27BQ5VT28 67 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 ABLIM2Q6H8Q1 611 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 H3F3CQ6NXT2 135 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 LINC00596Q86U02 117 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 PDZD9Q8IXQ8 264 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 ACBD4Q8NC06 268 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 OR51T1Q8NGJ9 327 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 OR14K1Q8NGZ2 314 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 RHBDD1Q8TEB9 315 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 ATOH1Q92858 354 aaPredicted RBP3.29□□□□□ -1.88
RNF38-203ENST00000353739 RAB18Q9NP72 206 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 GPR84Q9NQS5 396 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 CGGBP1Q9UFW8 167 aaPredicted RBP3.29□□□□□ -1.88
RNF38-203ENST00000353739 OPN4Q9UHM6 478 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 KLK13Q9UKR3 277 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 FLVCR2Q9UPI3 526 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 FXYD6-FXYD2A0A087WZ82 144 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 A0A1B0GTH9 108 aa3.29□□□□□ -1.88
RNF38-203ENST00000353739 OR14I1A6ND48 311 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms