RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CAMK2BQ13554 666 aa10.89□□□□□ -0.67
SMAD9-201ENST00000350148 Q6ZTK2 550 aa10.89□□□□□ -0.67
SMAD9-201ENST00000350148 NPEPL1Q8NDH3 523 aa10.89□□□□□ -0.67
SMAD9-201ENST00000350148 MOGAT1Q96PD6 335 aa10.89□□□□□ -0.67
SMAD9-201ENST00000350148 FOXB1Q99853 325 aa10.89□□□□□ -0.67
SMAD9-201ENST00000350148 COPS3Q9UNS2 423 aa10.89□□□□□ -0.67
SMAD9-201ENST00000350148 LIFP15018 202 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 GABRR1P24046 479 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 KIAA0141Q14154 515 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-201ENST00000350148 WIPI1Q5MNZ9 446 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-201ENST00000350148 HIST2H3PS2Q5TEC6 136 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 GLIPR1L1Q6UWM5 242 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 APOOLQ6UXV4 268 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 PSMF1Q92530 271 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 BSCL2Q96G97 398 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-201ENST00000350148 C4orf45Q96LM5 186 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 DCLRE1CQ96SD1 692 aaKnown RBP10.88□□□□□ -0.67
SMAD9-201ENST00000350148 ANGPTL4Q9BY76 406 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 DTX4Q9Y2E6 619 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 F5H5P2 479 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 PPA1Q15181 289 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 BAK1Q16611 211 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 ARHGEF39Q8N4T4 335 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 IL17RDQ8NFM7 739 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 OR51E1Q8TCB6 317 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 PELI1Q96FA3 418 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 TSPAN10Q9H1Z9 355 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-201ENST00000350148 RHBDD3Q9Y3P4 386 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 LOC102724200A0A096LPH7 203 aaPredicted RBP10.88□□□□□ -0.67
SMAD9-201ENST00000350148 IGKV3-11P04433 115 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 INHBBP09529 407 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 LYPD4Q6UWN0 246 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 ANGPTL5Q86XS5 388 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 OR4D10Q8NGI6 311 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 LRP12Q9Y561 859 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 ATG2BQ96BY7 2078 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 PTBP3O95758 552 aaKnown RBP10.88□□□□□ -0.67
SMAD9-201ENST00000350148 SOX18P35713 384 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 DDOSTP39656 456 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 PMPCAQ10713 525 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 CCDC190Q86UF4 302 aa10.88□□□□□ -0.67
SMAD9-201ENST00000350148 IGKV3D-11A0A0A0MRZ8 115 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 EPXP11678 715 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 ELK1P19419 428 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 C9orf135Q5VTT2 229 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 ZNF585AQ6P3V2 769 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 TMEM81Q6P7N7 255 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 CDC20BQ86Y33 519 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 OR4K15Q8NH41 348 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 GNRHR2Q96P88 292 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 ST6GALNAC5Q9BVH7 336 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 ENY2Q9NPA8 101 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 GPR84Q9NQS5 396 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 DNAJB11Q9UBS4 358 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 LRP5LA4QPB2 252 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 PRR19A6NJB7 356 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SLC17A2O00624 439 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 DFFBO76075 338 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 AKR1C4P17516 323 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 ALOX5APP20292 161 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 RAP2BP61225 183 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 STPG1Q5TH74 334 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 OR1F12Q8NHA8 337 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 PAQR8Q8TEZ7 354 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SULT4A1Q9BR01 284 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SUCNR1Q9BXA5 334 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SLIRPQ9GZT3 109 aaKnown RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 GPR27Q9NS67 375 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 TMEM74BQ9NUR3 256 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 KCNS2Q9ULS6 477 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 POLDIP2Q9Y2S7 368 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 OR2M5A3KFT3 312 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 TIMM8AO60220 97 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 MEOX2P50222 304 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 RPS27AP62979 156 aaKnown RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 UBA52P62987 128 aaKnown RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SRPXP78539 464 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SSX1Q16384 188 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 DMKNQ6E0U4 476 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 ALKAL2Q6UX46 152 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 PLXDC2Q6UX71 529 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 C17orf107Q6ZR85 190 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 CLRN3Q8NCR9 226 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 SPSB1Q96BD6 273 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 PRDM6Q9NQX0 595 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 LTBP2Q14767 1821 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 A0A1B0GV50 99 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 GATCO43716 136 aaKnown RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 MT-ND4P03905 459 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 ADRB1P08588 477 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 RAB6AP20340 208 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 BLVRBP30043 206 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 PDZK1IP1Q13113 114 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 STEAP1BQ6NZ63 245 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 OR2W3Q7Z3T1 314 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 NAA40Q86UY6 237 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 TMEM200AQ86VY9 491 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 MCHR2Q969V1 340 aa10.87□□□□□ -0.67
SMAD9-201ENST00000350148 APOBEC3DQ96AK3 386 aaPredicted RBP10.87□□□□□ -0.67
SMAD9-201ENST00000350148 C10orf35Q96D05 121 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms