RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 RNPEPL1Q9HAU8 725 aa12.79□□□□□ -0.36
COPE-202ENST00000349893 PNRC2Q9NPJ4 139 aaKnown RBP12.79□□□□□ -0.36
COPE-202ENST00000349893 RPS6KA6Q9UK32 745 aa12.79□□□□□ -0.36
COPE-202ENST00000349893 IGHV3OR15-7A0A075B7D8 119 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 A0A1W2PRD5 423 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 A0A1W2PRF3 423 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 A0A1W2PRM7 423 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 F5H5K5 113 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.78□□□□□ -0.36
COPE-202ENST00000349893 M0R1W7 72 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 DCTN6O00399 190 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 CHST1O43916 411 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 IFNA14P01570 189 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 TGM4P49221 684 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 ELF3P78545 371 aaPredicted RBP12.78□□□□□ -0.36
COPE-202ENST00000349893 POU4F2Q12837 409 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 NFYCQ13952 458 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 PCK2Q16822 640 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 LRRC75BQ2VPJ9 315 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 ATPAF1Q5TC12 328 aaPredicted RBP12.78□□□□□ -0.36
COPE-202ENST00000349893 HCP5Q6MZN7 132 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 PTCHD4Q6ZW05 846 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 SLC36A1Q7Z2H8 476 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 MRPL21Q7Z2W9 205 aaKnown RBP12.78□□□□□ -0.36
COPE-202ENST00000349893 C11orf53Q8IXP5 236 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 FAM216BQ8N7L0 139 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 C17orf50Q8WW18 174 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 STON2Q8WXE9 905 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 CCL13Q99616 98 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 ATF6BQ99941 703 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 OCSTAMPQ9BR26 566 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 RERGLQ9H628 205 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 METTL8Q9H825 291 aaKnown RBP12.78□□□□□ -0.36
COPE-202ENST00000349893 NKIRAS1Q9NYS0 192 aa12.78□□□□□ -0.36
COPE-202ENST00000349893 DYNC2H1Q8NCM8 4307 aaKnown RBP12.77□□□□□ -0.36
COPE-202ENST00000349893 RYR2Q92736 4967 aa12.77□□□□□ -0.36
COPE-202ENST00000349893 EPPK1P58107 5090 aaKnown RBP12.77□□□□□ -0.37
COPE-202ENST00000349893 A0A087WUU8 490 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 IGLV1-36A0A0B4J1U3 117 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 FFAR1O14842 300 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 PTP4A3O75365 173 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 TXNDC12O95881 172 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 LCATP04180 440 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 IGLL1P15814 213 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 AMY2BP19961 511 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 IFNA8P32881 189 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 MDH1P40925 334 aaKnown RBP12.77□□□□□ -0.37
COPE-202ENST00000349893 COL10A1Q03692 680 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 ZNF92Q03936 586 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 MZT1Q08AG7 82 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 TRAM2Q15035 370 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 LY6EQ16553 131 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 CYBRD1Q53TN4 286 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 NANOGP8Q6NSW7 305 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 MBOAT2Q6ZWT7 520 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 TSEN54Q7Z6J9 526 aaKnown RBP12.77□□□□□ -0.37
COPE-202ENST00000349893 SLC26A10Q8NG04 563 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 PIFOQ8TCI5 191 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 CITED2Q99967 270 aaPredicted RBP12.77□□□□□ -0.37
COPE-202ENST00000349893 NDEL1Q9GZM8 345 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 ZNF702PQ9H963 129 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 STAB2Q8WWQ8 2551 aa12.77□□□□□ -0.37
COPE-202ENST00000349893 hCG_1807616A0A1W2PRN6 198 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 A6NLC8 198 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 ACOT8O14734 319 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 NDUFB3O43676 98 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 NDUFB2O95178 105 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 GRPP07492 148 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 CRABP1P29762 137 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 CDKN2AP42771 156 aaKnown RBP12.76□□□□□ -0.37
COPE-202ENST00000349893 GPR4P46093 362 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 SNAI3Q3KNW1 292 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 ERICH5Q6P6B1 374 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 OR51G2Q8NGK0 314 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 ZBTB9Q96C00 473 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 TSSK2Q96PF2 358 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 PITX2Q99697 317 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 B9D2Q9BPU9 175 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 WNT10AQ9GZT5 417 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 DNTTIP1Q9H147 329 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 C14orf119Q9NWQ9 140 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 DNAJB11Q9UBS4 358 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 CYB5R1Q9UHQ9 305 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 SIGLEC7Q9Y286 467 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 SF3B6Q9Y3B4 125 aaKnown RBP12.76□□□□□ -0.37
COPE-202ENST00000349893 BIRC6Q9NR09 4857 aa12.76□□□□□ -0.37
COPE-202ENST00000349893 WI2-2373I1.2A0A1W2PRP0 233 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 BHLHE40O14503 412 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 CD33P20138 364 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 ANOS1P23352 680 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 OTX1P32242 354 aaPredicted RBP12.75□□□□□ -0.37
COPE-202ENST00000349893 TPTEP56180 551 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 SELENOWP63302 87 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 LRRC10Q5BKY1 277 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 RABL3Q5HYI8 236 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 STUMQ69YW2 141 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 PGBD2Q6P3X8 592 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 DNM1P34Q6PK57 102 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 TBPL2Q6SJ96 375 aa12.75□□□□□ -0.37
COPE-202ENST00000349893 ZNF730Q6ZMV8 503 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms