RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 C1QTNF9P0C862 333 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 TMIGD3P0DMS9 266 aaPredicted RBP18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 STOMP27105 288 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 NR4A2P43354 598 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 ART1P52961 327 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 GLYATL3Q5SZD4 288 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 PYHIN1Q6K0P9 492 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 CMTM4Q8IZR5 234 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 JAGN1Q8N5M9 183 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 MINDY2Q8NBR6 621 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 SLC25A38Q96DW6 304 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 SORCS2Q96PQ0 1159 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 CGGBP1Q9UFW8 167 aaPredicted RBP18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 PROCRQ9UNN8 238 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 FAM215AQ9Y5M1 114 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 LOC100509620A0A075B734 347 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 A0A0G2JMP0 313 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 A0A0X1KG70 313 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 A0A1B0GVG6 124 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 CIB4A0PJX0 185 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 XRCC2O43543 280 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 TNFSF13O75888 250 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 HOXB1P14653 301 aaPredicted RBP18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 TIMP3P35625 211 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 COLCA1Q6ZS62 124 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 LYPD6Q86Y78 171 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 CENPSQ8N2Z9 138 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 Q8N402 240 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 OR4M2Q8NGB6 313 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 OR51D1Q8NGF3 324 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 SYNPRQ8TBG9 265 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 PP6455Q8WZ26 134 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 AKAP1Q92667 903 aaKnown RBP eCLIP18.67■□□□□ 0.582e-6■□□□□ 10
TSPAN3-202ENST00000346495 SLC25A28Q96A46 364 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 FAM3DQ96BQ1 224 aa18.67■□□□□ 0.58
TSPAN3-202ENST00000346495 LOC100289279A0A1B0GTE1 492 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 IL2RAP01589 272 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 CSF3P09919 207 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 COX5AP20674 150 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 RANBP1P43487 201 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 CAPZA1P52907 286 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 UBE2NP61088 152 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 PITPNAQ00169 270 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 SCN1BQ07699 218 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 TRIM16LQ309B1 348 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 DCDC5Q6ZRR9 648 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 CDH26Q8IXH8 852 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 POC5Q8NA72 575 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 C1orf162Q8NEQ5 155 aaPredicted RBP18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 SEMA6DQ8NFY4 1073 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 OR52N4Q8NGI2 321 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 OR2AE1Q8NHA4 323 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 STARD4Q96DR4 205 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 S100A16Q96FQ6 103 aaKnown RBP18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 BOD1Q96IK1 185 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 SLX1AQ9BQ83 275 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 UQCC2Q9BRT2 126 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 METTL17Q9H7H0 456 aaPredicted RBP18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 PIGLQ9Y2B2 252 aa18.66■□□□□ 0.58
TSPAN3-202ENST00000346495 C5orf49A4QMS7 147 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 RAD51DO75771 328 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 LYZL6O75951 148 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 CGAP01215 116 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 ALDOBP05062 364 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 APLNRP35414 380 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 POU3F4P49335 361 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 OXA1LQ15070 435 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 GABRA6Q16445 453 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 C2orf76Q3KRA6 126 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 UNQ6494/PRO21346Q6UXR6 183 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 Q6ZNX1 250 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 UTS2BQ765I0 119 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 OR5AS1Q8N127 324 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 DTX3Q8N9I9 347 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 SETD6Q8TBK2 473 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 POM121L2Q96KW2 1035 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 RHBDL2Q9NX52 303 aa18.65■□□□□ 0.58
TSPAN3-202ENST00000346495 CACNA1GO43497 2377 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 PRRG2O14669 202 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 MAGEB3O15480 346 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 TOXO94900 526 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 ALX3O95076 343 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 CCNOP22674 350 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 MAP2K3P46734 347 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 MDP1Q86V88 176 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 ZNF584Q8IVC4 421 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 GABRG1Q8N1C3 465 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 HAVCR1Q96D42 359 aa18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 TP63Q9H3D4 680 aaPredicted RBP18.64■□□□□ 0.57
TSPAN3-202ENST00000346495 A0A1W2PQ09 198 aa18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 EDN3P14138 238 aa18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 FAHP16930 419 aa18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 HOXD11P31277 338 aaPredicted RBP18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 RIPPLY1Q0D2K3 151 aa18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 TRIQKQ629K1 86 aa18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 GFRALQ6UXV0 394 aa18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 ZNF610Q8N9Z0 462 aa18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 ZCCHC14Q8WYQ9 949 aaKnown RBP18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 SPSB4Q96A44 273 aa18.63■□□□□ 0.57
TSPAN3-202ENST00000346495 SNRNP40Q96DI7 357 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms