RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 Q3ZCU0 254 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 ZNF343Q6P1L6 599 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 TBPL2Q6SJ96 375 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 FIZ1Q96SL8 496 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 DUXBA0A1W2PPF3 345 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 DSCR3O14972 297 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 TMEM104Q8NE00 496 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 LRRC15Q8TF66 581 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 PDLIM7Q9NR12 457 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 NTNG1Q9Y2I2 539 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 RPLP1P05386 114 aaKnown RBP17.64■□□□□ 0.41
HDAC4-201ENST00000345617 ZNF17P17021 662 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 DUSP8Q13202 625 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 SLC16A12Q6ZSM3 486 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 USP3Q9Y6I4 520 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 SHANK1Q9Y566 2161 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 HYAL4Q2M3T9 481 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 TMEM268Q5VZI3 342 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 ST8SIA1Q92185 356 aa17.64■□□□□ 0.41
HDAC4-201ENST00000345617 OR8G1Q15617 311 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 ZNF384Q8TF68 577 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 WDFY2Q96P53 400 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 IP6K3Q96PC2 410 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 KLF16Q9BXK1 252 aaPredicted RBP17.63■□□□□ 0.41
HDAC4-201ENST00000345617 FOXJ3Q9UPW0 622 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 DOCK3Q8IZD9 2030 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 LTBP3Q9NS15 1303 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 STUMQ69YW2 141 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 SLC26A10Q8NG04 563 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 RAB40CQ96S21 281 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 ZGRF1Q86YA3 2104 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 KIR2DS2P43631 304 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 WDR89Q96FK6 387 aaPredicted RBP17.63■□□□□ 0.41
HDAC4-201ENST00000345617 FAM234AQ9H0X4 552 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 NRASP01111 189 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 ANKRD34CP0C6C1 535 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 DIO1P49895 249 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 EDDM3BP56851 147 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 SLC39A11Q8N1S5 342 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 TMEM178AQ8NBL3 297 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 PFN4Q8NHR9 129 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 GOT1L1Q8NHS2 421 aaPredicted RBP17.63■□□□□ 0.41
HDAC4-201ENST00000345617 ZPBPQ9BS86 351 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 SIRT7Q9NRC8 400 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 CD99P14209 185 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 SMAGPQ0VAQ4 97 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 OR10D4PQ8NGN7 298 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 SLC23A1Q9UHI7 598 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 TMEM238LA0A1B0GVL6 79 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 A6NJY4 79 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 SMAD6O43541 496 aaKnown RBP17.63■□□□□ 0.41
HDAC4-201ENST00000345617 NHLH1Q02575 133 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 NHLH2Q02577 135 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 FAHD2BQ6P2I3 314 aaPredicted RBP17.63■□□□□ 0.41
HDAC4-201ENST00000345617 CCDC190Q86UF4 302 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 LINC00346Q8IVM7 164 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 FAHD2AQ96GK7 314 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 NPAS1Q99742 590 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 TIMM10BQ9Y5J6 103 aa17.63■□□□□ 0.41
HDAC4-201ENST00000345617 GPX5O75715 221 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 SLURP2P0DP57 97 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 ELAVL1Q15717 326 aaKnown RBP17.62■□□□□ 0.41
HDAC4-201ENST00000345617 OR5M10Q6IEU7 315 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 UBALD1Q8TB05 177 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 ERGIC1Q969X5 290 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 FAM210BQ96KR6 192 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 HPP00738 406 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 PP6455Q8WZ26 134 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 Q6ZN92 141 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 OR2T6Q8NHC8 308 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 PDXPQ96GD0 296 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 HS3ST1O14792 307 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 MBTPS2O43462 519 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 GALMQ96C23 342 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 ADGRL4Q9HBW9 690 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 SLC17A4Q9Y2C5 497 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 M0R1X1 148 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 ZNF813Q6ZN06 617 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 CTSFQ9UBX1 484 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 DUS4LO95620 317 aaKnown RBP17.62■□□□□ 0.41
HDAC4-201ENST00000345617 FAHD1Q6P587 224 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 FAM3CQ92520 227 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 UBE2ZQ9H832 354 aaPredicted RBP17.62■□□□□ 0.41
HDAC4-201ENST00000345617 NAT8BQ9UHF3 227 aa17.62■□□□□ 0.41
HDAC4-201ENST00000345617 CDC14CA4D256 554 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 KLRC4-KLRK1H3BQV0 150 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 HES1Q14469 280 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 STAC2Q6ZMT1 411 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 DOK4Q8TEW6 326 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 TM4SF18Q96CE8 201 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 STARD5Q9NSY2 213 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 TIMM9Q9Y5J7 89 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 CCSO14618 274 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 TSPAN12O95859 305 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 TBXA2RP21731 343 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 FPR2P25090 351 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 TXNRD2Q9NNW7 524 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 UBE2L5PA0A1B0GUS4 154 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 FAM74A7A6NL05 159 aa17.61■□□□□ 0.41
HDAC4-201ENST00000345617 HERVK_113P61574 105 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms