RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 MITFO75030 526 aaPredicted RBP12.09□□□□□ -0.47
HMGN3-202ENST00000344726 FSHBP01225 129 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 SLC15A1P46059 708 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 CRISP1P54107 249 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 ATP6AP1Q15904 470 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 ZNF181Q2M3W8 571 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 KLHL12Q53G59 568 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 DCAF12L2Q5VW00 463 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 LIPNQ5VXI9 398 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 SHFQ7M4L6 423 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 C1QL2Q7Z5L3 287 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 KLHL36Q8N4N3 616 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 CELF2-AS1Q8N7Q2 184 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 OR4M2Q8NGB6 313 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 OR56B2PQ8NGI1 322 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 OR5K1Q8NHB7 308 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 OTOSQ8NHW6 89 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 SGK3Q96BR1 496 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 ADAT1Q9BUB4 502 aaKnown RBP12.09□□□□□ -0.47
HMGN3-202ENST00000344726 TOR3AQ9H497 397 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 PAPOLBQ9NRJ5 636 aaKnown RBP12.09□□□□□ -0.47
HMGN3-202ENST00000344726 UFSP2Q9NUQ7 469 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 DNAJC27Q9NZQ0 273 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 KIF17Q9P2E2 1029 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 PCDHB10Q9UN67 800 aa12.09□□□□□ -0.47
HMGN3-202ENST00000344726 TBX1O43435 398 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 XRCC2O43543 280 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 FAM20BO75063 409 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 ATP5HO75947 161 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 ANXA2P07355 339 aaKnown RBP12.08□□□□□ -0.48
HMGN3-202ENST00000344726 WNT2P09544 360 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 EPHA1P21709 976 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 HSD11B1P28845 292 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 EPHA2P29317 976 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 NAA10P41227 235 aaPredicted RBP12.08□□□□□ -0.48
HMGN3-202ENST00000344726 RASSF2P50749 326 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 HCCSP53701 268 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 ZNF121P58317 390 aaPredicted RBP12.08□□□□□ -0.48
HMGN3-202ENST00000344726 FAM3AP98173 230 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 OR8G1Q15617 311 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 C1orf146Q5VVC0 180 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 FAM57BQ71RH2 274 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 SLC16A9Q7RTY1 509 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 PARP8Q8N3A8 854 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 C19orf18Q8NEA5 215 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 Q8TCH9 128 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 DNAJC9Q8WXX5 260 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 DUS3LQ96G46 650 aaKnown RBP12.08□□□□□ -0.48
HMGN3-202ENST00000344726 TMEM246Q9BRR3 403 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 PPP1R3EQ9H7J1 279 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 TVP23BQ9NYZ1 205 aa12.08□□□□□ -0.48
HMGN3-202ENST00000344726 MRPL15Q9P015 296 aaKnown RBP12.08□□□□□ -0.48
HMGN3-202ENST00000344726 POLR3KQ9Y2Y1 108 aaPredicted RBP12.08□□□□□ -0.48
HMGN3-202ENST00000344726 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 PPIAL4CA0A0B4J2A2 164 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 CCDC182A6NF36 153 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 A8MXK9 166 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 J3QLI3 93 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 M0R129 80 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 PRKYO43930 277 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 GMDSO60547 372 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 FOXH1O75593 365 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
HMGN3-202ENST00000344726 LYNP07948 512 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 RPS7P62081 194 aaKnown RBP12.07□□□□□ -0.48
HMGN3-202ENST00000344726 APOFQ13790 326 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 PTGES3Q15185 160 aaKnown RBP12.07□□□□□ -0.48
HMGN3-202ENST00000344726 SNAPC1Q16533 368 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 ZNF404Q494X3 552 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 SLC35D3Q5M8T2 416 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 LRRN1Q6UXK5 716 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 AMIGO2Q86SJ2 522 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 MUC20Q8N307 709 aaPredicted RBP12.07□□□□□ -0.48
HMGN3-202ENST00000344726 DEFB108BQ8NET1 73 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 THEM6Q8WUY1 208 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 LRTOMTQ8WZ04 291 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 REEP6Q96HR9 211 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 PLEKHA8Q96JA3 519 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 SLC22A4Q9H015 551 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
HMGN3-202ENST00000344726 C7orf69Q9H7B7 122 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 BRD7Q9NPI1 651 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 AP4S1Q9Y587 144 aa12.07□□□□□ -0.48
HMGN3-202ENST00000344726 hCG_38984A0A1B0GV85 526 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 LRRC30A6NM36 301 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 PRR32B1ATL7 298 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 G3V2T6 193 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 H2BFMP0C1H6 154 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 ALOX5APP20292 161 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 GATA3P23771 443 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 FASP25445 335 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 PAX2Q02962 417 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 TIGD6Q17RP2 521 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 KDM4DQ6B0I6 523 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 LYPD2Q6UXB3 125 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 ASRGL1Q7L266 308 aa12.06□□□□□ -0.48
HMGN3-202ENST00000344726 BCDIN3DQ7Z5W3 292 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms