RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CST1P01037 141 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 GRPP07492 148 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 RAP2AP10114 183 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 PSKH1P11801 424 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 HSD11B1P28845 292 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 PITPNBP48739 271 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 SLC25A1P53007 311 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 RPL15P61313 204 aaKnown RBP10.38□□□□□ -0.75
SGCA-202ENST00000344627 MAB21L1Q13394 359 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 EIF2B1Q14232 305 aaKnown RBP10.38□□□□□ -0.75
SGCA-202ENST00000344627 MPPED2Q15777 294 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 KCNJ8Q15842 424 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 C11orf91Q3C1V1 193 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 GLYATL3Q5SZD4 288 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 ERI1Q8IV48 349 aaKnown RBP10.38□□□□□ -0.75
SGCA-202ENST00000344627 IQCF1Q8N6M8 205 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 CELF2-AS1Q8N7Q2 184 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 OR10S1Q8NGN2 331 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 OR6N2Q8NGY6 317 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 GIPC3Q8TF64 312 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 UPRTQ96BW1 309 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 DUX5Q96PT3 197 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 KCNJ15Q99712 375 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 DGCR6LQ9BY27 220 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 SLC22A4Q9H015 551 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 MMADHCQ9H3L0 296 aaPredicted RBP10.38□□□□□ -0.75
SGCA-202ENST00000344627 MED20Q9H944 212 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 ZNF69Q9UC07 566 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 PRPF19Q9UMS4 504 aaKnown RBP10.38□□□□□ -0.75
SGCA-202ENST00000344627 MMP24Q9Y5R2 645 aa10.38□□□□□ -0.75
SGCA-202ENST00000344627 TENM1Q9UKZ4 2725 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
SGCA-202ENST00000344627 hCG_1807616A0A1W2PRN6 198 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 C5orf63A6NC05 138 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 DNAJC9-AS1A6NH13 148 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 FAM183AA6NL82 134 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 ZNF878C9JN71 531 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 E2F6O75461 281 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 LIPFP07098 398 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 GSTT1P30711 240 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 CD80P33681 288 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 CD200P41217 278 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 SLC15A1P46059 708 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 NPY4RP50391 375 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 BLVRAP53004 296 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 OR8B8Q15620 311 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 TIGD6Q17RP2 521 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 GFOD2Q3B7J2 385 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 ZNF404Q494X3 552 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 SFRP4Q6FHJ7 346 aaPredicted RBP10.37□□□□□ -0.75
SGCA-202ENST00000344627 LYPD2Q6UXB3 125 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 BCL6BQ8N143 479 aaPredicted RBP10.37□□□□□ -0.75
SGCA-202ENST00000344627 TMEM86BQ8N661 226 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 OR56B2PQ8NGI1 322 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 RAB40AQ8WXH6 277 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 TECTBQ96PL2 329 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 FEVQ99581 238 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 NIPSNAP1Q9BPW8 284 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 CHID1Q9BWS9 393 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 OR51V1Q9H2C8 321 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 BRD7Q9NPI1 651 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 TRIM36Q9NQ86 728 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 DNAJC27Q9NZQ0 273 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 KIF17Q9P2E2 1029 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 RNF7Q9UBF6 113 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 CLN8Q9UBY8 286 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 PCDHGB1Q9Y5G3 927 aa10.37□□□□□ -0.75
SGCA-202ENST00000344627 IGHV2-70DA0A0C4DH43 119 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 A0A1B0GWJ7 208 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 DHRS12A0PJE2 317 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 ANKRD30BLA7E2S9 258 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 C3orf80F5H4A9 247 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 GMDSO60547 372 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 T-ENOLP0DO92 83 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 PAICSP22234 425 aaKnown RBP10.36□□□□□ -0.75
SGCA-202ENST00000344627 GATA4P43694 442 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 CX3CR1P49238 355 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 GRB2P62993 217 aaKnown RBP10.36□□□□□ -0.75
SGCA-202ENST00000344627 HOXA4Q00056 320 aaPredicted RBP10.36□□□□□ -0.75
SGCA-202ENST00000344627 MZT1Q08AG7 82 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 KLF17Q5JT82 389 aaPredicted RBP10.36□□□□□ -0.75
SGCA-202ENST00000344627 C16orf87Q6PH81 154 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 DCDC5Q6ZRR9 648 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 PARP8Q8N3A8 854 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 OR8S1Q8NH09 359 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 Q8TCH9 128 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 ASB9Q96DX5 294 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 INTS14Q96SY0 518 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 NUDT16L1Q9BRJ7 211 aaKnown RBP10.36□□□□□ -0.75
SGCA-202ENST00000344627 NMNAT2Q9BZQ4 307 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 PRDM13Q9H4Q3 707 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 SP140LQ9H930 580 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 UNKLQ9H9P5 680 aaKnown RBP10.36□□□□□ -0.75
SGCA-202ENST00000344627 ZNF556Q9HAH1 456 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 NOX4Q9NPH5 578 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 CMC2Q9NRP2 79 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 C1orf123Q9NWV4 160 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 TAS2R1Q9NYW7 299 aa10.36□□□□□ -0.75
SGCA-202ENST00000344627 MRPL15Q9P015 296 aaKnown RBP10.36□□□□□ -0.75
SGCA-202ENST00000344627 PDP1Q9P0J1 537 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms