RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 ZNF404Q494X3 552 aa16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 GLYATL3Q5SZD4 288 aa16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 NLRC3Q7RTR2 1065 aa16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 ERI1Q8IV48 349 aaKnown RBP16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 OR6N2Q8NGY6 317 aa16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 NIPAL2Q9H841 368 aa16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 OR5V1Q9UGF6 321 aa16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 OPN4Q9UHM6 478 aa16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 PPIAL4AQ9Y536 164 aa16.81■□□□□ 0.28
CEACAM3-201ENST00000344550 LOC105371242A0A075B767 164 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 FAM183AA6NL82 134 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 HLA-DPB1P04440 258 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 PSKH1P11801 424 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 CA6P23280 308 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 FPR2P25090 351 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 OPRL1P41146 370 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 DCDC5Q6ZRR9 648 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 FTMTQ8N4E7 242 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 IQCF1Q8N6M8 205 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 OTOSQ8NHW6 89 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 ZNF420Q8TAQ5 688 aaPredicted RBP16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 NEIL1Q96FI4 390 aaPredicted RBP16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 SUCNR1Q9BXA5 334 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 CADM1Q9BY67 442 aaKnown RBP16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 C14orf119Q9NWQ9 140 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 ZNF391Q9UJN7 358 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 INSIG2Q9Y5U4 225 aa16.8■□□□□ 0.28
CEACAM3-201ENST00000344550 NDUFA2O43678 99 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 CYB5R3P00387 301 aaPredicted RBP16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 RPS2P15880 293 aaKnown RBP16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 PMELP40967 661 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 CX3CR1P49238 355 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 HILS1P60008 231 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 ZNF154Q13106 437 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 C11orf91Q3C1V1 193 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 PLBD1Q6P4A8 553 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 FAHD1Q6P587 224 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 PRSS45Q7RTY3 260 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 DEFB108BQ8NET1 73 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 SEMA6DQ8NFY4 1073 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 OR2AE1Q8NHA4 323 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 OTULINQ96BN8 352 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 TMEM246Q9BRR3 403 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 ADAT1Q9BUB4 502 aaKnown RBP16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 MRI1Q9BV20 369 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 SSBP3Q9BWW4 388 aaPredicted RBP16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 PRRG3Q9BZD7 231 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 OR51V1Q9H2C8 321 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 RNF7Q9UBF6 113 aa16.79■□□□□ 0.28
CEACAM3-201ENST00000344550 ANKRD30BLA7E2S9 258 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 LYNP07948 512 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 NPY4RP50391 375 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 ESRRGP62508 458 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 TIGD6Q17RP2 521 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 DEGS2Q6QHC5 323 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 LRRN1Q6UXK5 716 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 CSNK2A3Q8NEV1 391 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 OR8B3Q8NGG8 313 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 UTP4Q969X6 686 aaKnown RBP16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 OR8B2Q96RD0 313 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 OR10A2Q9H208 303 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 MED20Q9H944 212 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 NTN4Q9HB63 628 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 ABCB9Q9NP78 766 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 PAPOLBQ9NRJ5 636 aaKnown RBP16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 ENOPH1Q9UHY7 261 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 AUP1Q9Y679 476 aa16.78■□□□□ 0.28
CEACAM3-201ENST00000344550 ACOD1A6NK06 481 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 TRAPPC2LH3BP13 241 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 PHYHO14832 338 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 FAM20BO75063 409 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 TIPRLO75663 272 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 ANXA2P07355 339 aaKnown RBP16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 H2BFMP0C1H6 154 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 PRKACGP22612 351 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 FAM3AP98173 230 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 PAX8Q06710 450 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 TUSC1Q2TAM9 212 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 BTNL3Q6UXE8 466 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 SLC16A9Q7RTY1 509 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 CPOQ8IVL8 374 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 OR56B2PQ8NGI1 322 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 OR5K1Q8NHB7 308 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 SGK3Q96BR1 496 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 DUS3LQ96G46 650 aaKnown RBP16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 YIPF3Q9GZM5 350 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 MMP26Q9NRE1 261 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 KIF17Q9P2E2 1029 aa16.77■□□□□ 0.28
CEACAM3-201ENST00000344550 FBN3Q75N90 2809 aa16.77■□□□□ 0.27
CEACAM3-201ENST00000344550 TRIM77I1YAP6 450 aa16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 SLC2A1P11166 492 aa16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 SLC2A5P22732 501 aa16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 PSMB10P40306 273 aa16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 CRISP1P54107 249 aa16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 ZNF121P58317 390 aaPredicted RBP16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 GNB2P62879 340 aa16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 PAX2Q02962 417 aa16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 HS3ST5Q8IZT8 346 aa16.76■□□□□ 0.27
CEACAM3-201ENST00000344550 BPIFB2Q8N4F0 458 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms