RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 THOC6Q86W42 341 aaKnown RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 KCNRGQ8N5I3 272 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 HSD17B11Q8NBQ5 300 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 OR56B1Q8NGI3 324 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 OR10D4PQ8NGN7 298 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 CD200R1Q8TD46 325 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 PLPPR2Q96GM1 343 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 GMPPAQ96IJ6 420 aaPredicted RBP6.46□□□□□ -1.38
ZNF540-202ENST00000343599 ATOH8Q96SQ7 321 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 FAIM2Q9BWQ8 316 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 LAT2Q9GZY6 243 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 FLVCR2Q9UPI3 526 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 ARL5AQ9Y689 179 aa6.46□□□□□ -1.38
ZNF540-202ENST00000343599 A0A087WUJ7 227 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 A0A1B0GUS0 222 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 ARRDC5A6NEK1 342 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 NAP1L6A6NFF2 107 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 FAM157AC9JC47 383 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 C19orf84I3L1E1 186 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 CLIC1O00299 241 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 SURF4O15260 269 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 OGG1O15527 345 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 BCL2L11O43521 198 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 UBL3O95164 117 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 RAB36O95755 333 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 NPPBP16860 134 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 GCH1P30793 250 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 ECI1P42126 302 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 MAGEB1P43366 347 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 PITPNAQ00169 270 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 RBM39Q14498 530 aaKnown RBP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 OR4D1Q15615 310 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 SCGB2B2Q4G0G5 96 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 LANCL3Q6ZV70 420 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 BOLLQ8N9W6 283 aaKnown RBP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 DNAAF1Q8NEP3 725 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 FAM210BQ96KR6 192 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 FUZQ9BT04 418 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 MRI1Q9BV20 369 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 PROK2Q9HC23 129 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 MAN2C1Q9NTJ4 1040 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 TESQ9UGI8 421 aaKnown RBP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 DAPP1Q9UN19 280 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 TIMM10BQ9Y5J6 103 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 IGKV3D-15A0A087WSY6 115 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 ELOA3CA0A087WX78 387 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 TRDCB7Z8K6 153 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 F5H5P2 479 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 ADAM20O43506 726 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 NDUFS3O75489 264 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 BCKDHAP12694 445 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 WNT5AP41221 380 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 PTH2RP49190 550 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 MMP16P51512 607 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 CCR4P51679 360 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 CDKN2DP55273 166 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 AP3S2P59780 193 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 RAB1AP62820 205 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 LSM11P83369 360 aaKnown RBP eCLIP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 FAM174BQ3ZCQ3 159 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 SLC25A30Q5SVS4 291 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 DMRTA1Q5VZB9 504 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 LRRTM1Q86UE6 522 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 SPNS2Q8IVW8 549 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 ZNF614Q8N883 585 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 OR51S1Q8NGJ8 323 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 LMF2Q9BU23 707 aaKnown RBP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 AKIRIN1Q9H9L7 192 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 SEMA4BQ9NPR2 832 aaPredicted RBP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 FAM120CQ9NX05 1096 aaKnown RBP6.45□□□□□ -1.38
ZNF540-202ENST00000343599 STARD10Q9Y365 291 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 DYRK1BQ9Y463 629 aa6.45□□□□□ -1.38
ZNF540-202ENST00000343599 PRRC2AP48634 2157 aaKnown RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 GJE1A6NN92 205 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 DEFB108AA8MXU0 73 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 IFNL4K9M1U5 179 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 M0R143 59 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 RFXANKO14593 260 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 GLCEO94923 617 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 CRISP1P54107 249 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 DGCR2P98153 550 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 PNLIPRP3Q17RR3 467 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 VMACQ2NL98 169 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 OR10K2Q6IF99 312 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ETFRF1Q6IPR1 90 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 NR2C2APQ86WQ0 139 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 ADPRHL1Q8NDY3 354 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 OR52I1Q8NGK6 324 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 RASL10BQ96S79 203 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 WDR13Q9H1Z4 485 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 PLEKHA1Q9HB21 404 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 TREM1Q9NP99 234 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 CALML5Q9NZT1 146 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 COPS7AQ9UBW8 275 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 CACFD1Q9UGQ2 172 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 GPR55Q9Y2T6 319 aaPredicted RBP6.44□□□□□ -1.38
ZNF540-202ENST00000343599 PRSS21Q9Y6M0 314 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 A0A1W2PRV1 198 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 CDC14BO60729 498 aa6.44□□□□□ -1.38
ZNF540-202ENST00000343599 GGCTO75223 188 aaKnown RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms