RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 PLCE1Q9P212 2302 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 TMEM129A0AVI4 362 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 PTGES3LE9PB15 166 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 PSMD9O00233 223 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 CDK1P06493 297 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 KITLGP21583 273 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 DDOSTP39656 456 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 GBX2P52951 348 aaPredicted RBP16.04■□□□□ 0.16
CDHR4-201ENST00000343366 GABARAPL2P60520 117 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 SLC35A2P78381 396 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 TIGD6Q17RP2 521 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 Q5PR19 223 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 FDX2Q6P4F2 183 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 PGAP1Q75T13 922 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 MRPL21Q7Z2W9 205 aaKnown RBP16.04■□□□□ 0.16
CDHR4-201ENST00000343366 RFLNBQ8N5W9 214 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 CCDC54Q8NEL0 328 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 SPSB4Q96A44 273 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 CCL19Q99731 98 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 CDCA4Q9BXL8 241 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 MS4A5Q9H3V2 200 aa16.04■□□□□ 0.16
CDHR4-201ENST00000343366 DSCAMO60469 2012 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 H7C1Q1 480 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 J3QLW9 94 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 MYL12BO14950 172 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 TBX1O43435 398 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 ERCC1P07992 297 aaPredicted RBP16.03■□□□□ 0.16
CDHR4-201ENST00000343366 LIMS3P0CW19 117 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 LIMS4P0CW20 117 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 ATP6V1B1P15313 513 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 ZNF19P17023 458 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 CCR9P51686 369 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 SWI5Q1ZZU3 235 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 CCDC58Q4VC31 144 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 PRSS57Q6UWY2 283 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 FAM57BQ71RH2 274 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 NAA40Q86UY6 237 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 FTMTQ8N4E7 242 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 C4orf36Q96KX1 117 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 ZNF649Q9BS31 505 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 TRAF4Q9BUZ4 470 aaPredicted RBP16.03■□□□□ 0.16
CDHR4-201ENST00000343366 TTTY10Q9BZA0 68 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 PBOV1Q9GZY1 135 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 DUSP13Q9UII6 198 aa16.03■□□□□ 0.16
CDHR4-201ENST00000343366 NOP16Q9Y3C1 178 aaKnown RBP16.03■□□□□ 0.16
CDHR4-201ENST00000343366 PLSCR5A0PG75 271 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 PRR32B1ATL7 298 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 INAFM1C9JVW0 142 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 RGS10O43665 173 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 SRSF10O75494 262 aaKnown RBP16.02■□□□□ 0.16
CDHR4-201ENST00000343366 MTRF1O75570 445 aaKnown RBP16.02■□□□□ 0.16
CDHR4-201ENST00000343366 HTR1AP08908 422 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 TGM4P49221 684 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 PPOXP50336 477 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 OR12D2P58182 307 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 TAS2R43P59537 309 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 SNAI3Q3KNW1 292 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 TP53I3Q53FA7 332 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 BCL2L15Q5TBC7 163 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 PRSS48Q7RTY5 328 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 ELMOD2Q8IZ81 293 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 CMBLQ96DG6 245 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 SIGLEC11Q96RL6 698 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 DIRC2Q96SL1 478 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 MND1Q9BWT6 205 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 MRPL37Q9BZE1 423 aaKnown RBP16.02■□□□□ 0.16
CDHR4-201ENST00000343366 SLC22A4Q9H015 551 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 BRD7Q9NPI1 651 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 PTTG3PQ9NZH4 202 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 OR52A1Q9UKL2 312 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 LAMP3Q9UQV4 416 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 LRCH1Q9Y2L9 728 aa16.02■□□□□ 0.16
CDHR4-201ENST00000343366 A0A1W2PPW3 197 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 LOC390937A0A1W2PQ73 354 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 M0R233 179 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 RPP14O95059 124 aaKnown RBP16.01■□□□□ 0.15
CDHR4-201ENST00000343366 SLC2A1P11166 492 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 ZNF12P17014 697 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 EEF1B2P24534 225 aaKnown RBP16.01■□□□□ 0.15
CDHR4-201ENST00000343366 ETV1P50549 477 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 ERVS71-1P61550 626 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 PSG7Q13046 419 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 GK2Q14410 553 aaPredicted RBP16.01■□□□□ 0.15
CDHR4-201ENST00000343366 FAM209AQ5JX71 171 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 SPATA46Q5T0L3 261 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 C11orf71Q6IPW1 123 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 CATSPERDQ86XM0 798 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 RORBQ92753 470 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 TRMT61AQ96FX7 289 aaKnown RBP16.01■□□□□ 0.15
CDHR4-201ENST00000343366 REEP6Q96HR9 211 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 TRIM36Q9NQ86 728 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 ACOXLQ9NUZ1 547 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 UBAP1Q9NZ09 502 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 PURGQ9UJV8 347 aaKnown RBP16.01■□□□□ 0.15
CDHR4-201ENST00000343366 N6AMT1Q9Y5N5 214 aa16.01■□□□□ 0.15
CDHR4-201ENST00000343366 IQCF6A8MYZ5 107 aa16■□□□□ 0.15
CDHR4-201ENST00000343366 H7C417 338 aa16■□□□□ 0.15
CDHR4-201ENST00000343366 TIMM8AO60220 97 aaPredicted RBP16■□□□□ 0.15
CDHR4-201ENST00000343366 SOD3P08294 240 aa16■□□□□ 0.15
CDHR4-201ENST00000343366 UBCP0CG48 685 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms