RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SLC22A12Q96S37 553 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 SLC2A4RGQ9NR83 387 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 TMEM242Q9NWH2 141 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 FOLR1P15328 257 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 CCR4P51679 360 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 HAGHQ16775 308 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 ANKRD55Q3KP44 614 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 EMC4Q5J8M3 183 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 CHST4Q8NCG5 386 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 COL26A1Q96A83 441 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 INTS14Q96SY0 518 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 CREBZFQ9NS37 354 aa16.54■□□□□ 0.24
SMPD1-201ENST00000342245 OR1D2P34982 312 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 ACAA2P42765 397 aaKnown RBP16.53■□□□□ 0.24
SMPD1-201ENST00000342245 GPR1P46091 355 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 ERVFC1-1P60608 527 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 RAB35Q15286 201 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 ASPHD2Q6ICH7 369 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 ZNF343Q6P1L6 599 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 FAM219AQ8IW50 185 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 PCSK9Q8NBP7 692 aaKnown RBP16.53■□□□□ 0.24
SMPD1-201ENST00000342245 RIMS4Q9H426 269 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-201ENST00000342245 FTCDNL1E5RQL4 147 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 RPLP1P05386 114 aaKnown RBP16.53■□□□□ 0.24
SMPD1-201ENST00000342245 CHRM2P08172 466 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 OR5H8P0DN80 308 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 HYAL4Q2M3T9 481 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 ASB5Q8WWX0 329 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 NIPSNAP3BQ9BS92 247 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 PARP12Q9H0J9 701 aaKnown RBP16.53■□□□□ 0.24
SMPD1-201ENST00000342245 TAS2R4Q9NYW5 299 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 TUBD1Q9UJT1 453 aa16.53■□□□□ 0.24
SMPD1-201ENST00000342245 NPIPA5A0A0B4J1W7 369 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 RBFOX3A6NFN3 312 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 NPIPA7E9PJI5 369 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 HSD17B6O14756 317 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 TK1P04183 234 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 NPIPA8P0DM63 369 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 SLC11A1P49279 550 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 RGS19P49795 217 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 SLC17A1Q14916 467 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 JAGN1Q8N5M9 183 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 OR51A2Q8NGJ7 313 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 HHIPL1Q96JK4 782 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 OR8B4Q96RC9 309 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 C1orf123Q9NWV4 160 aa16.52■□□□□ 0.24
SMPD1-201ENST00000342245 CGGBP1Q9UFW8 167 aaPredicted RBP16.52■□□□□ 0.24
SMPD1-201ENST00000342245 HTTP42858 3142 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 A0A087WV62 115 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 APBB3O95704 486 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 TXNDC12O95881 172 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 GUSBP08236 651 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 CSF2RAP15509 400 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 SUPT4H1P63272 117 aaKnown RBP16.52■□□□□ 0.23
SMPD1-201ENST00000342245 PLAURQ03405 335 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 VN1R2Q8NFZ6 395 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 IL36AQ9UHA7 158 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 ANAPC10Q9UM13 185 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 YIPF1Q9Y548 306 aa16.52■□□□□ 0.23
SMPD1-201ENST00000342245 IGKV1-8A0A0C4DH67 115 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 H3BSH0 61 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 NPSP0C0P6 89 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 DNASE1L1P49184 302 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 CLDN6P56747 220 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 GLO1Q04760 184 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 GPR18Q14330 331 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 GPR157Q5UAW9 335 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 ZNF429Q86V71 674 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 NAXEQ8NCW5 288 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 RHBDD1Q8TEB9 315 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 SLC25A44Q96H78 314 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-201ENST00000342245 Q9N2J8 555 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 E5RGE8 158 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 TP53I11O14683 189 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 NTHL1P78549 312 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 SPEM2Q0P670 501 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 ITPRIPL2Q3MIP1 535 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 TXNDC8Q6A555 127 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 DPY19L4Q7Z388 723 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 OTOSQ8NHW6 89 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 STT3BQ8TCJ2 826 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 ELOVL3Q9HB03 270 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 DNAJB12Q9NXW2 375 aaKnown RBP16.51■□□□□ 0.23
SMPD1-201ENST00000342245 NSG2Q9Y328 171 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 URGCP-MRPS24S4R325 110 aa16.51■□□□□ 0.23
SMPD1-201ENST00000342245 DCDC2BA2VCK2 349 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 RENP00797 406 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 AMBPP02760 352 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 SOD2P04179 222 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 APLNRP35414 380 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 GRK6P43250 576 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 RND2P52198 227 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 RAC1P63000 192 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 IQCJQ1A5X6 159 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 IAH1Q2TAA2 248 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-201ENST00000342245 COA6Q5JTJ3 125 aaKnown RBP16.5■□□□□ 0.23
SMPD1-201ENST00000342245 TMEM184AQ6ZMB5 413 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 THNSL2Q86YJ6 484 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 CMTM8Q8IZV2 173 aa16.5■□□□□ 0.23
SMPD1-201ENST00000342245 POC1BQ8TC44 478 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms