RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 OR5B2Q96R09 309 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 FRYLO94915 3013 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF878C9JN71 531 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 GLULP15104 373 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 CSNK2A1P68400 391 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-201ENST00000340437 CSNK2A3Q8NEV1 391 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 OR5AP2Q8NGF4 316 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 RRNAD1Q96FB5 475 aaKnown RBP12.8□□□□□ -0.36
CPSF7-201ENST00000340437 LIN37Q96GY3 246 aaPredicted RBP12.8□□□□□ -0.36
CPSF7-201ENST00000340437 ARHGAP5-AS1Q96IT6 56 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 GPR84Q9NQS5 396 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 FSCN3Q9NQT6 498 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 RHBDD3Q9Y3P4 386 aa12.8□□□□□ -0.36
CPSF7-201ENST00000340437 MYO7BQ6PIF6 2116 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 ACTL6AO96019 429 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 SERPINA2P20848 420 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 ID4P47928 161 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 FDX2Q6P4F2 183 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 OR51T1Q8NGJ9 327 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 OR1N1Q8NGS0 311 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 MITD1Q8WV92 249 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 TMEM234Q8WY98 164 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 TLNRD1Q9H1K6 362 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 A0A1B0GTI1 187 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 A0A1B0GTQ1 180 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-201ENST00000340437 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-201ENST00000340437 TMEM218A2RU14 115 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 TMEM200CA6NKL6 621 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 TPT1P13693 172 aaKnown RBP12.79□□□□□ -0.36
CPSF7-201ENST00000340437 GABRA4P48169 554 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 NAA40Q86UY6 237 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 LDLRAD3Q86YD5 345 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 AQP3Q92482 292 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 FN3KRPQ9HA64 309 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 FGF21Q9NSA1 209 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 OR5AC2Q9NZP5 309 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 WDFY4Q6ZS81 3184 aa12.79□□□□□ -0.36
CPSF7-201ENST00000340437 MED19A0JLT2 244 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-201ENST00000340437 BLACEA4D250 179 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 VSTM2BA6NLU5 285 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 CD8AP01732 235 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 KLK2P20151 261 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 SCRN3Q0VDG4 424 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 TDGQ13569 410 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF813Q6ZN06 617 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 OR5H2Q8NGV7 314 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 ASB10Q8WXI3 467 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 CDCA3Q99618 268 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-201ENST00000340437 PIGMQ9H3S5 423 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 CD74P04233 296 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 CRHP06850 196 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 GUSBP08236 651 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 DAP3P51398 398 aaKnown RBP12.78□□□□□ -0.36
CPSF7-201ENST00000340437 RNF4P78317 190 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 HSD11B2P80365 405 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-201ENST00000340437 PRAMEF20Q5VT98 475 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 BAP18Q8IXM2 172 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 BATF2Q8N1L9 274 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 LRRC18Q8N456 261 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 DOCK7Q96N67 2140 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 CNTNAP3BQ96NU0 1288 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 EHFQ9NZC4 300 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 KLHL13Q9P2N7 655 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF629Q9UEG4 869 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-201ENST00000340437 MMACHCQ9Y4U1 282 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 RALGAPA1Q6GYQ0 2036 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 SSX5O60225 188 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 IFI6P09912 130 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 SSBP1Q04837 148 aaKnown RBP12.78□□□□□ -0.36
CPSF7-201ENST00000340437 NUBPLQ8TB37 319 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 TMEM59Q9BXS4 323 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 METTL7AQ9H8H3 244 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 BARX1Q9HBU1 254 aaPredicted RBP12.78□□□□□ -0.36
CPSF7-201ENST00000340437 CACNA1HO95180 2353 aa12.78□□□□□ -0.36
CPSF7-201ENST00000340437 PNLIPRP2P54317 469 aa12.77□□□□□ -0.36
CPSF7-201ENST00000340437 ZNF121P58317 390 aaPredicted RBP12.77□□□□□ -0.36
CPSF7-201ENST00000340437 SPAG16Q8N0X2 631 aa12.77□□□□□ -0.36
CPSF7-201ENST00000340437 SVBPQ8N300 66 aa12.77□□□□□ -0.36
CPSF7-201ENST00000340437 ZSCAN4Q8NAM6 433 aaPredicted RBP12.77□□□□□ -0.36
CPSF7-201ENST00000340437 PPP4R1LQ9P1A2 415 aa12.77□□□□□ -0.36
CPSF7-201ENST00000340437 C2CD4DB7Z1M9 353 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 G3V3Y1 287 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 H0YIZ8 118 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 CFIP05156 583 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 RCC1P18754 421 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-201ENST00000340437 NPBWR1P48145 328 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 RAB32Q13637 225 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 CDCP2Q5VXM1 449 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 NKAIN3Q8N8D7 197 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 TERB2Q8NHR7 220 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 ARL11Q969Q4 196 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 S100A13Q99584 98 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 SLC22A11Q9NSA0 550 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 TRBV11-1A0A0K0K1C0 115 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 C5orf63A6NC05 138 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 A6NIZ1 184 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 CBR1P16152 277 aa12.77□□□□□ -0.37
CPSF7-201ENST00000340437 GABRR1P24046 479 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms