RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 DTWD2Q8NBA8 298 aa16.71■□□□□ 0.27
PSPC1-201ENST00000338910 PRRT1Q99946 306 aa16.71■□□□□ 0.27
PSPC1-201ENST00000338910 AKIRIN1Q9H9L7 192 aaPredicted RBP16.71■□□□□ 0.27
PSPC1-201ENST00000338910 TMED7Q9Y3B3 224 aa16.71■□□□□ 0.27
PSPC1-201ENST00000338910 C11orf98E9PRG8 122 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 TXNDC12O95881 172 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 HTR2CP28335 458 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 RAB5BP61020 215 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 PMPCAQ10713 525 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 MEF2DQ14814 521 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 CORO6Q6QEF8 472 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 DRAM2Q6UX65 266 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 CD163Q86VB7 1156 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 NFAM1Q8NET5 270 aaPredicted RBP16.7■□□□□ 0.26
PSPC1-201ENST00000338910 CHMP1AQ9HD42 196 aaPredicted RBP16.7■□□□□ 0.26
PSPC1-201ENST00000338910 CSAG2Q9Y5P2 127 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 TMEM14AQ9Y6G1 99 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 C5orf52A6NGY3 159 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 EEF1E1-BLOC1S5C9J1V9 151 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 EMP2P54851 167 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 MOGAT2Q3SYC2 334 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 MESTQ5EB52 335 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 GLYATL3Q5SZD4 288 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 FAM69BQ5VUD6 431 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 TMEM225Q6GV28 225 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 SLC23A3Q6PIS1 610 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 PPP1R3BQ86XI6 285 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 ZDHHC22Q8N966 263 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 C8orf44Q96CB5 159 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 TSPAN32Q96QS1 320 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 FAM96BQ9Y3D0 163 aa16.7■□□□□ 0.26
PSPC1-201ENST00000338910 M0R296 226 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 EIF1AYO14602 144 aaKnown RBP16.69■□□□□ 0.26
PSPC1-201ENST00000338910 ZNF806P0C7X5 589 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 MPZP25189 248 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 EIF1AXP47813 144 aaKnown RBP16.69■□□□□ 0.26
PSPC1-201ENST00000338910 ADAM8P78325 824 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 ZNF584Q8IVC4 421 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 GPR119Q8TDV5 335 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 TCEAL3Q969E4 200 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 INTS14Q96SY0 518 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 EGLN1Q9GZT9 426 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 TINAGQ9UJW2 476 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 SLC22A13Q9Y226 551 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 MRPS18BQ9Y676 258 aaKnown RBP16.69■□□□□ 0.26
PSPC1-201ENST00000338910 TRAV36DV7A0A075B6V5 113 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 TMED7-TICAM2A0A0A6YYA0 188 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 A0A0A6YYH2 397 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 A0A0B4J2A0 478 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 TMEM235A6NFC5 223 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 A6NJ64 397 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 ZNF705EA8MWA4 302 aaPredicted RBP16.69■□□□□ 0.26
PSPC1-201ENST00000338910 LDLRAD4O15165 306 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 FARS2O95363 451 aaKnown RBP16.69■□□□□ 0.26
PSPC1-201ENST00000338910 GPANK1O95872 356 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 BGLAPP02818 100 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 MUC1P15941 1255 aaPredicted RBP16.69■□□□□ 0.26
PSPC1-201ENST00000338910 PAX6P26367 422 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 FAHD2BQ6P2I3 314 aaPredicted RBP16.69■□□□□ 0.26
PSPC1-201ENST00000338910 OR10R2Q8NGX6 335 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 DCUN1D4Q92564 292 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 RRNAD1Q96FB5 475 aaKnown RBP16.69■□□□□ 0.26
PSPC1-201ENST00000338910 FAHD2AQ96GK7 314 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 LPAR3Q9UBY5 353 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 SHPKQ9UHJ6 478 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 KCNG2Q9UJ96 466 aa16.69■□□□□ 0.26
PSPC1-201ENST00000338910 COL5A1P20908 1838 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 LOC100509620A0A075B734 347 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 UBE2CO00762 179 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 EIF1BO60739 113 aaKnown RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 PLGP00747 810 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 CD37P11049 281 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 EIF1P41567 113 aaKnown RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 RNASE10Q5GAN6 216 aaKnown RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 EEF1A1P5Q5VTE0 462 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 TCEAL6Q6IPX3 200 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 ADGRE4PQ86SQ3 457 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 OTOSQ8NHW6 89 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 RNF126Q9BV68 326 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 OR11A1Q9GZK7 315 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 ELOVL3Q9HB03 270 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 RHOFQ9HBH0 211 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 TRBV11-1A0A0K0K1C0 115 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 DBX1A6NMT0 343 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 PHYHO14832 338 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 S100A9P06702 114 aaKnown RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 PTAFRP25105 342 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 POLR2HP52434 150 aaKnown RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 CDNFQ49AH0 187 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 KCTD9Q7L273 389 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 ZSCAN4Q8NAM6 433 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 CASTOR1Q8WTX7 329 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 CPNE2Q96FN4 548 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 OR8B4Q96RC9 309 aa16.68■□□□□ 0.26
PSPC1-201ENST00000338910 ZNF587Q96SQ5 575 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 CGGBP1Q9UFW8 167 aaPredicted RBP16.68■□□□□ 0.26
PSPC1-201ENST00000338910 PNPP00491 289 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 CAV2P51636 162 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 SLC17A1Q14916 467 aa16.67■□□□□ 0.26
PSPC1-201ENST00000338910 TMEM200AQ86VY9 491 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms