RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SPRYD4Q8WW59 207 aaPredicted RBP12.84□□□□□ -0.35
PRKN-201ENST00000338468 SHARPINQ9H0F6 387 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 COPS3Q9UNS2 423 aa12.84□□□□□ -0.35
PRKN-201ENST00000338468 GGT3PA6NGU5 568 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 XRCC2O43543 280 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 PTBP3O95758 552 aaKnown RBP12.83□□□□□ -0.36
PRKN-201ENST00000338468 CYB5R3P00387 301 aaPredicted RBP12.83□□□□□ -0.36
PRKN-201ENST00000338468 MRPL3P09001 348 aaKnown RBP12.83□□□□□ -0.36
PRKN-201ENST00000338468 SBK2P0C263 348 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 CD200P41217 278 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 GATA4P43694 442 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 SRP9P49458 86 aaKnown RBP12.83□□□□□ -0.36
PRKN-201ENST00000338468 LRRN1Q6UXK5 716 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 MEPCEQ7L2J0 689 aaKnown RBP12.83□□□□□ -0.36
PRKN-201ENST00000338468 MOGAT3Q86VF5 341 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 LRRC28Q86X40 367 aaPredicted RBP12.83□□□□□ -0.36
PRKN-201ENST00000338468 RFLNBQ8N5W9 214 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 CELF2-AS1Q8N7Q2 184 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 OR51F2Q8NH61 342 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 TMEM186Q96B77 213 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 GAL3ST1Q99999 423 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 YIPF3Q9GZM5 350 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 OPA3Q9H6K4 179 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 G6PC2Q9NQR9 355 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 HIF1ANQ9NWT6 349 aa12.83□□□□□ -0.36
PRKN-201ENST00000338468 MRPL15Q9P015 296 aaKnown RBP12.83□□□□□ -0.36
PRKN-201ENST00000338468 hCG_38984A0A1B0GV85 526 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 ISPDA4D126 451 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 E9PQ18 207 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 TBX1O43435 398 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 PLPP2O43688 288 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 APOC1P02654 83 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 ALPLP05186 524 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 THBS2P35442 1172 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 BTG1P62324 171 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 MPPED2Q15777 294 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 ZNF181Q2M3W8 571 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 LCN1P1Q5VSP4 162 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 PRAMEF6Q5VXH4 476 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 NXNL2Q5VZ03 156 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 ZFP1Q6P2D0 407 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 PEG10Q86TG7 708 aaKnown RBP12.82□□□□□ -0.36
PRKN-201ENST00000338468 GLCCI1Q86VQ1 547 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 DVL3Q92997 716 aaPredicted RBP12.82□□□□□ -0.36
PRKN-201ENST00000338468 RAB39BQ96DA2 213 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 REEP6Q96HR9 211 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 IL4I1Q96RQ9 567 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 RBM4BQ9BQ04 359 aaKnown RBP12.82□□□□□ -0.36
PRKN-201ENST00000338468 PRRG3Q9BZD7 231 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 RIBC2Q9H4K1 309 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 PPP1R3EQ9H7J1 279 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 ADGRL4Q9HBW9 690 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 BRD7Q9NPI1 651 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 UBAP1Q9NZ09 502 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 ENOPH1Q9UHY7 261 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 LAMP5Q9UJQ1 280 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 LRP12Q9Y561 859 aa12.82□□□□□ -0.36
PRKN-201ENST00000338468 IFNL4K9M1U5 179 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 PSMD9O00233 223 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 ZNF205O95201 554 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 ZFP36P26651 326 aaKnown RBP12.81□□□□□ -0.36
PRKN-201ENST00000338468 PSMA6P60900 246 aaKnown RBP12.81□□□□□ -0.36
PRKN-201ENST00000338468 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
PRKN-201ENST00000338468 ROM1Q03395 351 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 OR8G1Q15617 311 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 TIGD6Q17RP2 521 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 TMEM155Q4W5P6 130 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 FAM201AQ5SY85 155 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 OR52H1Q8NGJ2 320 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 Q8TCH9 128 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 LYZL4Q96KX0 146 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 ADAT1Q9BUB4 502 aaKnown RBP12.81□□□□□ -0.36
PRKN-201ENST00000338468 SLC22A4Q9H015 551 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 OR10A2Q9H208 303 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 SP140LQ9H930 580 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 TMEM165Q9HC07 324 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 HAO2Q9NYQ3 351 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 USE1Q9NZ43 259 aa12.81□□□□□ -0.36
PRKN-201ENST00000338468 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.81□□□□□ -0.36
PRKN-201ENST00000338468 TRAV20A0A0B4J274 112 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 F5H0A9 414 aaPredicted RBP12.8□□□□□ -0.36
PRKN-201ENST00000338468 EI24O14681 340 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 GMDSO60547 372 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 FAM20BO75063 409 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 AVPP01185 164 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 SRD5A1P18405 259 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 DDOSTP39656 456 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 GSK3AP49840 483 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 SEC61A1P61619 476 aaKnown RBP12.8□□□□□ -0.36
PRKN-201ENST00000338468 C1orf229Q6ZS94 237 aaPredicted RBP12.8□□□□□ -0.36
PRKN-201ENST00000338468 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.8□□□□□ -0.36
PRKN-201ENST00000338468 OR8B12Q8NGG6 310 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 PGAM5Q96HS1 289 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 OR8B4Q96RC9 309 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 CNN2Q99439 309 aaKnown RBP12.8□□□□□ -0.36
PRKN-201ENST00000338468 TTTY10Q9BZA0 68 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 NIPAL2Q9H841 368 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 PATZ1Q9HBE1 687 aaKnown RBP12.8□□□□□ -0.36
PRKN-201ENST00000338468 S100A14Q9HCY8 104 aa12.8□□□□□ -0.36
PRKN-201ENST00000338468 UFSP2Q9NUQ7 469 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms