RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ZNF322Q6U7Q0 402 aaPredicted RBP5.6□□□□□ -1.51
CSTF3-201ENST00000323959 Q6YL49 198 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 TMPRSS11AQ6ZMR5 421 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 Q6ZT83 130 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 KRT77Q7Z794 578 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 PXKQ7Z7A4 578 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 HMGN2P46Q86SG4 172 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 PLCZ1Q86YW0 608 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ACBD7Q8N6N7 88 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 WDSUB1Q8N9V3 476 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 THRSPQ92748 146 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ZNF524Q96C55 264 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 WACQ9BTA9 647 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ZCCHC4Q9H5U6 513 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 DNAJC27Q9NZQ0 273 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 H2AFY2Q9P0M6 372 aaPredicted RBP5.6□□□□□ -1.51
CSTF3-201ENST00000323959 N6AMT1Q9Y5N5 214 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 SLC25A15Q9Y619 301 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 LIPT2A6NK58 231 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 VSTM5A8MXK1 200 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 MCIDASD6RGH6 385 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ZNF670-ZNF695F2Z2N8 137 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 TSPAN9O75954 239 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 LCKP06239 509 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 POU1F1P28069 291 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 DCTDP32321 178 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ETV1P50549 477 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 DAP3P51398 398 aaKnown RBP5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ZNF83P51522 516 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 H3F3AP84243 136 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 EGR3Q06889 387 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 TOMM34Q15785 309 aaPredicted RBP5.6□□□□□ -1.51
CSTF3-201ENST00000323959 DGUOKQ16854 277 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 TRIM16LQ309B1 348 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ALG10Q5BKT4 473 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 FAM209AQ5JX71 171 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 BICRALQ6AI39 1079 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 SLC16A9Q7RTY1 509 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 CPOQ8IVL8 374 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 CADM2Q8N3J6 435 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 SPERTQ8NA61 448 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ZNF563Q8TA94 476 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 IL17DQ8TAD2 202 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 TBC1D15Q8TC07 691 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 MED30Q96HR3 178 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 WDFY2Q96P53 400 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 IFT27Q9BW83 186 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 ASPNQ9BXN1 380 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 PTGES2Q9H7Z7 377 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 CTPS2Q9NRF8 586 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 SERINC1Q9NRX5 453 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 PPP4R1LQ9P1A2 415 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 CRNNQ9UBG3 495 aaPredicted RBP5.6□□□□□ -1.51
CSTF3-201ENST00000323959 AUP1Q9Y679 476 aa5.6□□□□□ -1.51
CSTF3-201ENST00000323959 DYNC1H1Q14204 4646 aaKnown RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 GJE1A6NN92 205 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 MYL12BO14950 172 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 GPR137BO60478 399 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 VAMP5O95183 116 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 AHSA1O95433 338 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 NR2C1P13056 603 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 ZNF41P51814 821 aaPredicted RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 RPL27P61353 136 aaKnown RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 RPL18Q07020 188 aaKnown RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 VASH1Q7L8A9 365 aaPredicted RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 ZNF454Q8N9F8 522 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 OR9Q1Q8NGQ5 310 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 DOK4Q8TEW6 326 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 LINC00476Q8WZB0 136 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 KTI12Q96EK9 354 aaPredicted RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 CMTM3Q96MX0 182 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 MRI1Q9BV20 369 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 SF3B5Q9BWJ5 86 aaKnown RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 SLIRPQ9GZT3 109 aaKnown RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 RABL2AQ9UBK7 228 aaPredicted RBP5.59□□□□□ -1.51
CSTF3-201ENST00000323959 RASD1Q9Y272 281 aa5.59□□□□□ -1.51
CSTF3-201ENST00000323959 TRAV27A0A087WT01 109 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 IQCMA0A1B0GVH7 501 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 M0R1B8 84 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 RGS13O14921 159 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 AIREO43918 545 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 CH25HO95992 272 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 PLATP00750 562 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 IGHV2-5P01817 119 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 HIST1H2ABP04908 130 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 CD37P11049 281 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 HIST1H1CP16403 213 aaKnown RBP5.59□□□□□ -1.52
CSTF3-201ENST00000323959 SPI1P17947 270 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 ZNF85Q03923 595 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 OXA1LQ15070 435 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 NDUFAF6Q330K2 333 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 DMKNQ6E0U4 476 aaPredicted RBP5.59□□□□□ -1.52
CSTF3-201ENST00000323959 DEGS2Q6QHC5 323 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 UNQ9370/PRO34162Q6UXP9 181 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 H1FNTQ75WM6 255 aaPredicted RBP5.59□□□□□ -1.52
CSTF3-201ENST00000323959 HIST3H2AQ7L7L0 130 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 NDUFA11Q86Y39 141 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 TIGD4Q8IY51 512 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 DEFB108BQ8NET1 73 aa5.59□□□□□ -1.52
CSTF3-201ENST00000323959 OR2T4Q8NH00 348 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms