RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 SLC22A6Q4U2R8 563 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 IGSF11Q5DX21 431 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 OR52W1Q6IF63 320 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 POMZP3Q6PJE2 187 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 ATG4DQ86TL0 474 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 GVQW1Q8N7I0 195 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 LINC00469Q8N7U9 141 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 SLC30A7Q8NEW0 376 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 ASB5Q8WWX0 329 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 TGIF2Q9GZN2 237 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 SCDO00767 359 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 PHYHO14832 338 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 SGCEO43556 437 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 STK17BO94768 372 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 ABCD3P28288 659 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 EMP2P54851 167 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 SNRPEP62304 92 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 EGR4Q05215 589 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 PLCXD2Q0VAA5 305 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 GFOD2Q3B7J2 385 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 TMPPEQ6ZT21 453 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 SLC29A4Q7RTT9 530 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 SLC16A13Q7RTY0 426 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 PAQR4Q8N4S7 273 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 APCDD1LQ8NCL9 501 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 KTI12Q96EK9 354 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 SLC25A44Q96H78 314 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 ZNF587Q96SQ5 575 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 HRH4Q9H3N8 390 aa15.29■□□□□ 0.04
SCAMP4-201ENST00000316097 IGLV3-12A0A075B6K2 115 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 TEX13DA0A0J9YY54 714 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 TTLL8A6PVC2 850 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 CD2P06729 351 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 ERCC1P07992 297 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 IL12BP29460 328 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 TOMM34Q15785 309 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 WBP2NLQ6ICG8 309 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 FJX1Q86VR8 437 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 SPSB2Q99619 263 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 HSPB2A8KAH6 182 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 SPARCP09486 303 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 SERPINF1P36955 418 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 RNF4P78317 190 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 PJVKQ0ZLH3 352 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 EIF2B1Q14232 305 aaKnown RBP15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 HSPB2Q16082 182 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 FNDC7Q5VTL7 733 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 FDX2Q6P4F2 183 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 TRAPPC6BQ86SZ2 158 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 CMBLQ96DG6 245 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 RRNAD1Q96FB5 475 aaKnown RBP15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 SLC2A8Q9NY64 477 aa15.28■□□□□ 0.04
SCAMP4-201ENST00000316097 MASP2O00187 686 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 PNMTP11086 282 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 CBR1P16152 277 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 DUSP3P51452 185 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 ZFP36L1Q07352 338 aaKnown RBP15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 EMC4Q5J8M3 183 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 MDGA2Q7Z553 956 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 ZNF679Q8IYX0 411 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 METTL21AQ8WXB1 218 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 NRIP2Q9BQI9 281 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 ACKR4Q9NPB9 350 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 CYTL1Q9NRR1 136 aa15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 ZNF107Q9UII5 783 aaPredicted RBP15.27■□□□□ 0.04
SCAMP4-201ENST00000316097 C11orf98E9PRG8 122 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 EIF1AYO14602 144 aaKnown RBP15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 HEXAP06865 529 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 GUSBP08236 651 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF806P0C7X5 589 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 EIF1AXP47813 144 aaKnown RBP15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 POLR2GP62487 172 aaKnown RBP eCLIP15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 SKP2Q13309 424 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 PEA15Q15121 130 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 MST1LQ2TV78 715 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 FAM209BQ5JX69 171 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 RBMS3Q6XE24 437 aaKnown RBP15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 ZDHHC22Q8N966 263 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 ZSCAN4Q8NAM6 433 aaPredicted RBP15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 AGBL5Q8NDL9 886 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 RNF128Q8TEB7 428 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 LIPHQ8WWY8 451 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 B9D1Q9UPM9 204 aa15.27■□□□□ 0.03
SCAMP4-201ENST00000316097 NUDT19A8MXV4 375 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 HCRTR2O43614 444 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 PLGP00747 810 aaPredicted RBP15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 FABP1P07148 127 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 FAM157CP0CG43 387 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 MUC1P15941 1255 aaPredicted RBP15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 ZNF117Q03924 483 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 RBM39Q14498 530 aaKnown RBP15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 AKIRIN2Q53H80 203 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 IL34Q6ZMJ4 242 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 SKA3Q8IX90 412 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 CHST4Q8NCG5 386 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 NFAM1Q8NET5 270 aaPredicted RBP15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 NUDCD2Q8WVJ2 157 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 MICU1Q9BPX6 476 aa15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 WDR77Q9BQA1 342 aaPredicted RBP15.26■□□□□ 0.03
SCAMP4-201ENST00000316097 RCC2Q9P258 522 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms