RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ZNF404Q494X3 552 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 SLC35D3Q5M8T2 416 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 FAHD2BQ6P2I3 314 aaPredicted RBP12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 SLC16A9Q7RTY1 509 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 SPICQ8N5J4 248 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 LRTOMTQ8WZ04 291 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 FAHD2AQ96GK7 314 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 ZNF556Q9HAH1 456 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 MRPL15Q9P015 296 aaKnown RBP12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 ZAR1LA6NP61 321 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 IFNL4K9M1U5 179 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 TNFRSF13BO14836 293 aaPredicted RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 FAM20BO75063 409 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 FCN3O75636 299 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 ATP5HO75947 161 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 LYNP07948 512 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 PAICSP22234 425 aaKnown RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 MDH2P40926 338 aaKnown RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 NAA10P41227 235 aaPredicted RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 HCCSP53701 268 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 AADACL4Q5VUY2 407 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 SLX4IPQ5VYV7 408 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 C12orf73Q69YU5 71 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 SHFQ7M4L6 423 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 C1QL2Q7Z5L3 287 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 BCDIN3DQ7Z5W3 292 aaKnown RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 AMIGO2Q86SJ2 522 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 PEG10Q86TG7 708 aaKnown RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 RFLNBQ8N5W9 214 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 SEMA6DQ8NFY4 1073 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 SPRYD4Q8WW59 207 aaPredicted RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 OTULINQ96BN8 352 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 TMEM246Q9BRR3 403 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 ADAT1Q9BUB4 502 aaKnown RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 FGF23Q9GZV9 251 aaPredicted RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 OPA3Q9H6K4 179 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 METTL17Q9H7H0 456 aaPredicted RBP12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 COPS3Q9UNS2 423 aa12.21□□□□□ -0.45
PPP1CA-201ENST00000312989 DYSFO75923 2080 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 A0A0G2JMP0 313 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 A0A0X1KG70 313 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 J3QLI3 93 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 XRCC2O43543 280 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 GMDSO60547 372 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 ZNF12P17014 697 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 ADRA2CP18825 462 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 ACKR3P25106 362 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 POLR2IP36954 125 aaKnown RBP12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 RASSF2P50749 326 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 ESRRGP62508 458 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 APOFQ13790 326 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 OR8B8Q15620 311 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 C1orf146Q5VVC0 180 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 ZNF841Q6ZN19 808 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 FAM57BQ71RH2 274 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 ZNF454Q8N9F8 522 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 OR4M2Q8NGB6 313 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 TMEM158Q8WZ71 300 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 ERGIC1Q969X5 290 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 LYZL4Q96KX0 146 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 TEAD3Q99594 435 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 SLC22A4Q9H015 551 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 TVP23BQ9NYZ1 205 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 DNAJC27Q9NZQ0 273 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 AP4S1Q9Y587 144 aa12.2□□□□□ -0.46
PPP1CA-201ENST00000312989 E9PQ18 207 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 H3BNX3 289 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 FOXH1O75593 365 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 VENTXO95231 258 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 IGLV3-1P01715 115 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 GATA3P23771 443 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 SRP14P37108 136 aaKnown RBP12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 PSMB10P40306 273 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 SLC15A1P46059 708 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 PSMA6P60900 246 aaKnown RBP12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 TAF13Q15543 124 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 OR8G1Q15617 311 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 SNAPC1Q16533 368 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 KLF17Q5JT82 389 aaPredicted RBP12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 DCAF12L2Q5VW00 463 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 LYPD2Q6UXB3 125 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 LRRN1Q6UXK5 716 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 KRT74Q7RTS7 529 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 KLBQ86Z14 1044 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 MUC20Q8N307 709 aaPredicted RBP12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 KLHL36Q8N4N3 616 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 GCSAMQ8N6F7 178 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 C19orf18Q8NEA5 215 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 REEP6Q96HR9 211 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 UFSP2Q9NUQ7 469 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 CTSZQ9UBR2 303 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 LRP12Q9Y561 859 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 INSIG2Q9Y5U4 225 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 FBN3Q75N90 2809 aa12.19□□□□□ -0.46
PPP1CA-201ENST00000312989 GGT3PA6NGU5 568 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 G3V2T6 193 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 SRSF10O75494 262 aaKnown RBP12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 LHBP01229 141 aa12.18□□□□□ -0.46
PPP1CA-201ENST00000312989 ANXA2P07355 339 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms