RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 A0A0A6YYJ9 748 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 GNGT2O14610 69 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 SELENOFO60613 162 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 FAM20BO75063 409 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 ANXA8P13928 327 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 POU1F1P28069 291 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 DAPP51397 102 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 GRB2P62993 217 aaKnown RBP16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 FAM3AP98173 230 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 ZNF154Q13106 437 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 KLF17Q5JT82 389 aaPredicted RBP16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 OTOSQ8NHW6 89 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 SPRYD4Q8WW59 207 aaPredicted RBP16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 ERGIC1Q969X5 290 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 OR51V1Q9H2C8 321 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 PCDHB10Q9UN67 800 aa16.57■□□□□ 0.24
PDZRN3-202ENST00000308537 hCG_38984A0A1B0GV85 526 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 TNFRSF13BO14836 293 aaPredicted RBP16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 PRODHO43272 600 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 E2F6O75461 281 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 TIPRLO75663 272 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 CX3CR1P49238 355 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 HILS1P60008 231 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 LYPD2Q6UXB3 125 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 ZNF841Q6ZN19 808 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 USP43Q70EL4 1123 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 SLC16A9Q7RTY1 509 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 WDR86Q86TI4 376 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 KLBQ86Z14 1044 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 CPOQ8IVL8 374 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 NRBF2Q96F24 287 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 ADAT1Q9BUB4 502 aaKnown RBP16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 SLC22A4Q9H015 551 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 TOR3AQ9H497 397 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 OCEL1Q9H607 264 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 PPP1R3EQ9H7J1 279 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 UFSP2Q9NUQ7 469 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 LRCH1Q9Y2L9 728 aa16.56■□□□□ 0.24
PDZRN3-202ENST00000308537 PRR23D1E9PI22 279 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 XRCC2O43543 280 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 GMDSO60547 372 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 PRR23D2P0DMB1 279 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 CPT2P23786 658 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 PSMB10P40306 273 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 SLC15A1P46059 708 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 ZNF121P58317 390 aaPredicted RBP16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 PAX8Q06710 450 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 OR8G1Q15617 311 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 SHFQ7M4L6 423 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 C11orf53Q8IXP5 236 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 PARP8Q8N3A8 854 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 C19orf18Q8NEA5 215 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 OPA3Q9H6K4 179 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 PPIAL4AQ9Y536 164 aa16.55■□□□□ 0.24
PDZRN3-202ENST00000308537 CCDC182A6NF36 153 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 GGT3PA6NGU5 568 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 PRR32B1ATL7 298 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 FCN3O75636 299 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 RGS9O75916 674 aaPredicted RBP16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 HMGN1P05114 100 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 EPHA2P29317 976 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 CD80P33681 288 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 EFNB1P98172 346 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 TAF13Q15543 124 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 TEX29Q8N6K0 151 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 PLPP7Q8NBV4 271 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 NANPQ8TBE9 248 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 SLC6A7Q99884 636 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 SSBP3Q9BWW4 388 aaPredicted RBP16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 ESM1Q9NQ30 184 aa16.54■□□□□ 0.24
PDZRN3-202ENST00000308537 LRRC30A6NM36 301 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 RPS2P15880 293 aaKnown RBP16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 ALOX5APP20292 161 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 PAICSP22234 425 aaKnown RBP16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 CRISP1P54107 249 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 OR8B8Q15620 311 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 ESCO2Q56NI9 601 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 SLC35D3Q5M8T2 416 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 ZNF826PQ6ZT77 177 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 FAM57BQ71RH2 274 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 C1orf87Q8N0U7 546 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 GCSAMQ8N6F7 178 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 ZFAND2BQ8WV99 257 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 OTULINQ96BN8 352 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 DUS3LQ96G46 650 aaKnown RBP16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 REEP6Q96HR9 211 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 ZNF556Q9HAH1 456 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 DNAJC27Q9NZQ0 273 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 CTSZQ9UBR2 303 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 MIOXQ9UGB7 285 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 N6AMT1Q9Y5N5 214 aa16.53■□□□□ 0.24
PDZRN3-202ENST00000308537 LHBP01229 141 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 ANXA2P07355 339 aaKnown RBP16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 LYNP07948 512 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 ACKR3P25106 362 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 DDOSTP39656 456 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 NAA10P41227 235 aaPredicted RBP16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 HCCSP53701 268 aa16.52■□□□□ 0.24
PDZRN3-202ENST00000308537 ATP6AP1Q15904 470 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms