RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 AQP4P55087 323 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 TPTEP56180 551 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 UBA52P62987 128 aaKnown RBP7.97□□□□□ -1.13
HMHB1-201ENST00000289448 MICAQ29983 383 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 ZNF404Q494X3 552 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 ESCO2Q56NI9 601 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 GLYATL3Q5SZD4 288 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 PRAMEF6Q5VXH4 476 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 OR2T5Q6IEZ7 315 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 RPL13AP3Q6NVV1 102 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 LYPD2Q6UXB3 125 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 ZBTB49Q6ZSB9 765 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 PGAP1Q75T13 922 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 DCXRQ7Z4W1 244 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 MUC20Q8N307 709 aaPredicted RBP7.97□□□□□ -1.13
HMHB1-201ENST00000289448 LINC00471Q8N535 108 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 SIGLECL1Q8N7X8 197 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 OR52L1Q8NGH7 329 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 OR2T4Q8NH00 348 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 OR2T29Q8NH02 315 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 C1orf147Q96MC9 270 aaPredicted RBP7.97□□□□□ -1.13
HMHB1-201ENST00000289448 ZNF48Q96MX3 618 aaPredicted RBP7.97□□□□□ -1.13
HMHB1-201ENST00000289448 DUX5Q96PT3 197 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 NIPSNAP1Q9BPW8 284 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 C9orf16Q9BUW7 83 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 SSBP3Q9BWW4 388 aaPredicted RBP7.97□□□□□ -1.13
HMHB1-201ENST00000289448 DGCR6LQ9BY27 220 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 SEMA6AQ9H2E6 1030 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 Q9H521 79 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 UFSP2Q9NUQ7 469 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 TBC1D23Q9NUY8 699 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 DNAJB9Q9UBS3 223 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 KCNG2Q9UJ96 466 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 NUP50Q9UKX7 468 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 PPIAL4AQ9Y536 164 aa7.97□□□□□ -1.13
HMHB1-201ENST00000289448 IGHV3OR16-10A0A075B7F0 116 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SAC3D1A6NKF1 404 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 ZNF593O00488 134 aaPredicted RBP7.96□□□□□ -1.14
HMHB1-201ENST00000289448 FAM20BO75063 409 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SPARCP09486 303 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 IGHV4-38-2P0DP08 117 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SLC2A1P11166 492 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 RPS2P15880 293 aaKnown RBP7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SPI1P17947 270 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 FPR2P25090 351 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 PRKXP51817 358 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SLC25A1P53007 311 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 MALLQ13021 153 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 OR8G1Q15617 311 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 LINC01590Q5TEZ4 76 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 DRAM2Q6UX65 266 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 ZNF841Q6ZN19 808 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SPATC1Q76KD6 591 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 MRPL21Q7Z2W9 205 aaKnown RBP7.96□□□□□ -1.14
HMHB1-201ENST00000289448 TMEM179BQ7Z7N9 219 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 IQCF1Q8N6M8 205 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 CELF2-AS1Q8N7Q2 184 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 Q8TCH9 128 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SPRYD4Q8WW59 207 aaPredicted RBP7.96□□□□□ -1.14
HMHB1-201ENST00000289448 GCDHQ92947 438 aaPredicted RBP7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SPTSSAQ969W0 71 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SLAMF6Q96DU3 332 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 JMJD8Q96S16 334 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 MRI1Q9BV20 369 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 MED20Q9H944 212 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 OR5V1Q9UGF6 321 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 RAB26Q9ULW5 256 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 SAMHD1Q9Y3Z3 626 aaKnown RBP7.96□□□□□ -1.14
HMHB1-201ENST00000289448 DOCK11Q5JSL3 2073 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 VWFP04275 2813 aa7.96□□□□□ -1.14
HMHB1-201ENST00000289448 IGHV2-70DA0A0C4DH43 119 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 FAM183AA6NL82 134 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 LRRC30A6NM36 301 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 C22orf46C9J442 243 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 FCN3O75636 299 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 FSTL3O95633 263 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 PTBP3O95758 552 aaKnown RBP7.95□□□□□ -1.14
HMHB1-201ENST00000289448 FMO3P31513 532 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 PITPNBP48739 271 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 ENTPD1P49961 510 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 ARMCX4Q5H9R4 360 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 TEX30Q5JUR7 227 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 CD300LDQ6UXZ3 194 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 DOK3Q7L591 496 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 PRSS45Q7RTY3 260 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 C1orf87Q8N0U7 546 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 GALNT4Q8N4A0 578 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 CBR4Q8N4T8 237 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 OR2T33Q8NG76 320 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 RAB40AQ8WXH6 277 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 TAF15Q92804 592 aaKnown RBP eCLIP7.95□□□□□ -1.14
HMHB1-201ENST00000289448 NEIL1Q96FI4 390 aaPredicted RBP7.95□□□□□ -1.14
HMHB1-201ENST00000289448 NR1H4Q96RI1 486 aaPredicted RBP7.95□□□□□ -1.14
HMHB1-201ENST00000289448 AMELYQ99218 206 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 FEVQ99581 238 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 CIB1Q99828 191 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 COPS4Q9BT78 406 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 ADAT1Q9BUB4 502 aaKnown RBP7.95□□□□□ -1.14
HMHB1-201ENST00000289448 PPP1R3EQ9H7J1 279 aa7.95□□□□□ -1.14
HMHB1-201ENST00000289448 REEP1Q9H902 201 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms