RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 KLK13Q9UKR3 277 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 VSIG4Q9Y279 399 aa16.25■□□□□ 0.19
PDLIM3-201ENST00000284767 FREM3P0C091 2139 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 SULT2B1O00204 365 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 SLC16A7O60669 478 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 RAD1O60671 282 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 ZNF41P51814 821 aaPredicted RBP16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 CAPZA1P52907 286 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 PLA2G2CQ5R387 149 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 DCAF12Q5T6F0 453 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 CATSPERDQ86XM0 798 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 ZDHHC22Q8N966 263 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 INO80EQ8NBZ0 244 aaPredicted RBP16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 MITD1Q8WV92 249 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 MED29Q9NX70 200 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 MRPS18BQ9Y676 258 aaKnown RBP16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 A0A1W2PNU3 283 aaPredicted RBP16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 PRSS37A4D1T9 235 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 CCSO14618 274 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 ZNF883P0CG24 379 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 APOBEC1P41238 236 aaKnown RBP16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 FOLR3P41439 243 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 HOXA1P49639 335 aaPredicted RBP16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 PRKXP51817 358 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 RIDAP52758 137 aaKnown RBP16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 BEX5Q5H9J7 111 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 OR1S2Q8NGQ3 325 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 SEC22AQ96IW7 307 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 TXNIPQ9H3M7 391 aa16.24■□□□□ 0.19
PDLIM3-201ENST00000284767 A0A1W2PNR3 127 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 F5H0A9 414 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 OR2T1O43869 369 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 TCN2P20062 427 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 BDKRB2P30411 391 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 OTX2P32243 289 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 ADAM8P78325 824 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 FMODQ06828 376 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 MFGE8Q08431 387 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 ZNF468Q5VIY5 522 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 FAHD2BQ6P2I3 314 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 RAB11FIP2Q7L804 512 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 OR2M3Q8NG83 312 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 FAHD2AQ96GK7 314 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 SLC25A44Q96H78 314 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 PHB2Q99623 299 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 NKX3-1Q99801 234 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 RPH3AQ9Y2J0 694 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 PCP4L1A6NKN8 68 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 EIF1AYO14602 144 aaKnown RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 FGF16O43320 207 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 MPZL1O95297 269 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 SPARCP09486 303 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 CCL3P10147 92 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 RAB6AP20340 208 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 EIF1AXP47813 144 aaKnown RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 SUMO3P55854 103 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 HFEQ30201 348 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 RNASE10Q5GAN6 216 aaKnown RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 ZNF813Q6ZN06 617 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 STOML3Q8TAV4 291 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 PPP1R14AQ96A00 147 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 CGGBP1Q9UFW8 167 aaPredicted RBP16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 PLEKHA6Q9Y2H5 1048 aa16.23■□□□□ 0.19
PDLIM3-201ENST00000284767 NSG1A0A0A6YYJ2 146 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 OR2AT4A6NND4 320 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 B4E171 279 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 TSPAN7P41732 249 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 POU3F1Q03052 451 aaPredicted RBP16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 PPP1R1AQ13522 171 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 ATXN7L3Q14CW9 347 aaPredicted RBP16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 C1orf100Q5SVJ3 147 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 RAB12Q6IQ22 244 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 C3orf33Q6P1S2 294 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 PUSL1Q8N0Z8 303 aaKnown RBP16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 AQP3Q92482 292 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 GAL3ST1Q99999 423 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 EMC6Q9BV81 110 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 ASF1BQ9NVP2 202 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 MLXQ9UH92 298 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 LOC390937A0A1W2PQ73 354 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 C9orf170A2RU37 121 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 NUDT19A8MXV4 375 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 SMAD9O15198 467 aaKnown RBP16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 KLK2P20151 261 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 MYBPHQ13203 477 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 MRPL22Q9NWU5 206 aaKnown RBP16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 FBXO9Q9UK97 447 aaPredicted RBP16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 PADI1Q9ULC6 663 aa16.22■□□□□ 0.19
PDLIM3-201ENST00000284767 TMEM235A6NFC5 223 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 GPR31O00270 319 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 SFTPDP35247 375 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 DNASE1L1P49184 302 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 CXADRP78310 365 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 TLE3Q04726 772 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 MOGAT2Q3SYC2 334 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 HAGHLQ6PII5 290 aaPredicted RBP16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 NKAIN3Q8N8D7 197 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 DDIT4LQ96D03 193 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 C5orf34Q96MH7 638 aa16.21■□□□□ 0.19
PDLIM3-201ENST00000284767 GNRHR2Q96P88 292 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms